Caenibius tardaugens: EGO55_12590
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Entry
EGO55_12590 CDS
T05741
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
ntd
Caenibius tardaugens
Brite
KEGG Orthology (KO) [BR:
ntd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ntd03009
]
EGO55_12590 (rimO)
Enzymes [BR:
ntd01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
EGO55_12590 (rimO)
Ribosome biogenesis [BR:
ntd03009
]
Prokaryotic type
ribosomal protein modification factors
EGO55_12590 (rimO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM_2
TRAM
Motif
Other DBs
NCBI-ProteinID:
AZI36689
LinkDB
All DBs
Position
complement(2689127..2690491)
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AA seq
454 aa
AA seq
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MATTIPQARRVGMVSLGCPKALVDSERILTKLRADGYAMSADYDGADVVLVNTCGFLDSA
KEESLAAIGEAIAENGRVIVTGCMGNEAEVIRERFPEVLAITGAHQYEAVVEAVHEAAPP
TQGPFVDLIPQMDVKLTPRHYSYLKISEGCNHACAFCIIPQLRGKLASRRIDAVLREAEK
LVAAGTQELLVISQDTSAYGVDVRHEERMWKDHPVRTHMTDLARELGQLRTAQGNAPWVR
LHYVYPYPHVDAVIPLMAEGLITPYLDIPFQHAAPSVLRAMKRPANEAKVLERLKAWREI
CPDIAIRSSFVVGFPGETEADFQYLLDWLDEAQLDRVGAFRFEPVEGAAANDLPGAVPEA
VKEERYARIMEKTEAISAAKLAAKVGRTIPVIIDEVGEPDEDGDIGATGRSQADAPEIDG
AVYLRDAPADLQPGDIIDVVIEDADAHDLFGAPA
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
atggctaccacaatccctcaagcacgccgagtcggcatggtcagcctcggctgtccgaaa
gctctggtcgactccgaacgcatcctgacaaaattgcgcgcggatggctatgccatgtcg
gccgattatgatggcgccgatgtggtgttggtcaacacctgcgggttcctcgattccgcc
aaggaagaaagccttgccgcaattggcgaggcgattgccgaaaacggccgcgtgatcgtg
accggctgcatgggcaacgaagccgaggtgatccgcgaacggttccccgaagtgctcgcc
atcaccggggcgcaccagtacgaagccgtggtcgaggccgtgcacgaggctgcgccgccc
acgcaggggccgtttgtcgacctgatcccccagatggacgtgaagctcacgccccgacat
tacagctatctgaagatttccgaaggctgcaaccatgcctgcgccttctgcatcatcccg
caattgcgtggaaaactggccagccgccggatcgatgcggtgctgcgcgaagcggaaaag
ctggtcgccgcgggcacgcaggaactgcttgtcatcagccaggacaccagcgcctatggc
gtggacgtgcgtcatgaagaacgcatgtggaaagaccatccggtccgcacccatatgacc
gatcttgcccgcgaactgggccagttgcgcaccgcgcagggcaatgcgccctgggtgcga
ctgcactatgtctatccttatccgcatgttgatgcggtgatcccgctgatggccgaaggg
ctgattacgccctatctcgacattcccttccagcatgccgcgccctcggtgttgcgcgcg
atgaaacgccctgcaaacgaggcgaaagtgctcgaacggctgaaggcatggcgcgagatc
tgccccgatatcgccatccggtcgagcttcgtggtcggttttcccggcgagacggaagcg
gatttccagtacctgctcgactggcttgatgaagcgcagctcgaccgggtgggtgcgttc
cgcttcgaaccggtcgaaggcgcagccgcgaacgatctgcccggcgccgtgccagaagcg
gtcaaggaagaacgctacgcccggatcatggaaaagaccgaagcgatcagcgcggccaag
ctggcggccaaagtcggccgcacgatcccggtaatcatcgacgaggtcggtgaacccgac
gaagacggcgatatcggcgccaccggccgcagccaggccgatgccccggaaatcgacggt
gcggtctatctgcgcgatgcccccgccgatctgcagccgggcgatatcatcgatgtcgtg
atcgaggatgcggacgcgcacgatctgttcggagccccggcctga
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