Caenibius tardaugens: EGO55_12925
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Entry
EGO55_12925 CDS
T05741
Name
(GenBank) RluA family pseudouridine synthase
KO
K06179
23S rRNA pseudouridine955/2504/2580 synthase [EC:
5.4.99.24
]
Organism
ntd
Caenibius tardaugens
Brite
KEGG Orthology (KO) [BR:
ntd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ntd03009
]
EGO55_12925
Enzymes [BR:
ntd01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.24 23S rRNA pseudouridine955/2504/2580 synthase
EGO55_12925
Ribosome biogenesis [BR:
ntd03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
EGO55_12925
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
YuA_Gp49
Motif
Other DBs
NCBI-ProteinID:
AZI36742
UniProt:
U2ZVM4
LinkDB
All DBs
Position
complement(2754111..2755412)
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AA seq
433 aa
AA seq
DB search
MAPSDEVRQFTVGHDDDGIRLDRWFKRHLPQIGFATVSRWARTGQIRVDGKRAKPEDRLE
AGQVLRIPPGGHAPDKQQATRRELTEEEIAQADAMLIHQDRAAIVLNKVPGLATQGGTRT
HSHVDGLLDAFAPDGPRPRLVHRLDKDTSGVLLVARTAGSAAFFSKRFSGRSAKKIYWAL
VVGVPDVAEGTIEAPIAKQPGTGGEKMHVDTENGQPAKTRYRVVDRAGNRAAWVELQPLT
GRTHQLRVHMAAIGHPIVGDGKYGGQDAFLTGSISRKMHLHARRLIIEHPDGAPLDVTAE
LPAHFAASMEQLGFDEVLSDAGGGFGVLADATPDSRETKKAAAKAHAKQYRKERRGERRR
RATTPDKPGGKGAGKTGGKTAAKTGARTGARTGARSGAKAAGKPAARGTGKPGTRAAPPR
PGTRPAGGKPPKR
NT seq
1302 nt
NT seq
+upstream
nt +downstream
nt
atggccccttccgatgaagtacggcagttcactgtcggccatgacgatgacggcattcgc
ctcgatcgctggttcaagcgccatttgccccagatcggctttgccacggtctcgcgctgg
gcgcgcaccggccagattcgtgtggatggcaagcgcgccaagcctgaagaccggctggaa
gcaggccaggtattgcgcatcccgccgggcggccacgcgccggacaagcagcaggccacg
cgccgcgagctgacggaagaggaaatcgcacaggccgatgcgatgctgatccatcaggat
agggcagccatcgtgctcaacaaggtgcctggccttgccacgcagggcggcacccggacg
catagccatgtcgatggtctgctcgatgcctttgcccccgatggcccgcgcccccggctg
gtgcaccggctcgacaaggatacttcgggcgtgctgctcgtcgcccgcacagccggaagc
gcggcctttttctccaagcggttttcgggtcggtccgcgaagaagatctactgggcactg
gtggtgggcgtgcccgatgtggccgaaggcacgatcgaggccccgattgccaagcaaccc
ggcaccggcggcgaaaaaatgcatgtcgataccgagaacggccagcccgccaaaacccgc
tatcgcgtggtggatcgcgcaggcaaccgcgcagcctgggtggaacttcagcccctgacc
gggcgcacgcaccagttgcgcgtgcacatggccgcgatcggccacccgattgtgggggac
ggcaaatatggtgggcaggacgcattcctgaccggcagcatcagccgcaagatgcatctg
cacgcccgccgcctgattatcgagcatcccgatggcgccccgctggacgtcacggcggag
cttccggcgcatttcgcggccagcatggaacaattgggtttcgatgaggtcctcagcgat
gcgggcggcggtttcggggttctggccgacgccacccccgattcccgggaaacgaagaag
gccgctgccaaggcgcacgccaagcagtaccgcaaggaacggcgcggtgaacggcggcgg
cgcgcaacgacaccggacaagccgggcggcaaaggcgccggtaagaccgggggcaagacg
gcggccaaaacgggggccagaacaggggccagaacaggggccaggtccggcgcgaaagcc
gctggcaaacctgccgccaggggtacgggcaaacccggcacgcgcgcggcaccaccacgc
cccggaacgcgtcctgctggcggcaagccacccaaacgctga
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