Caenibius tardaugens: EGO55_15290
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Entry
EGO55_15290 CDS
T05741
Name
(GenBank) HU family DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
ntd
Caenibius tardaugens
Brite
KEGG Orthology (KO) [BR:
ntd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ntd03032
]
EGO55_15290
03036 Chromosome and associated proteins [BR:
ntd03036
]
EGO55_15290
03400 DNA repair and recombination proteins [BR:
ntd03400
]
EGO55_15290
DNA replication proteins [BR:
ntd03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
EGO55_15290
Chromosome and associated proteins [BR:
ntd03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
EGO55_15290
DNA repair and recombination proteins [BR:
ntd03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
EGO55_15290
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_2
DUF2267
VWA_3
Motif
Other DBs
NCBI-ProteinID:
AZI37157
UniProt:
U2Y3L6
LinkDB
All DBs
Position
3246012..3246284
Genome browser
AA seq
90 aa
AA seq
DB search
MNKNDLISAVADSSGLSRSDATKAVEGVFDAISAALAKGDEVRLVGFGTFSTAKRKASTG
RNPRTGEAMTIKASTQPKFKAGKGLKDAVN
NT seq
273 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaaaacgatctcatcagcgccgttgccgattccagcggcctttcccgtagtgat
gcgaccaaggccgttgaaggtgtgttcgatgcgatcagcgccgcactggcgaagggcgac
gaagtgcgcctggtcggtttcggaaccttctcgaccgcaaagcgtaaggcttcgaccggc
cgtaacccgcgcaccggtgaagcgatgaccatcaaggcttcgacgcagccgaaattcaag
gccggcaagggcctgaaggacgccgtcaactaa
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