Caenibius tardaugens: EGO55_15540
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Entry
EGO55_15540 CDS
T05741
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
ntd
Caenibius tardaugens
Pathway
ntd00300
Lysine biosynthesis
ntd00470
D-Amino acid metabolism
ntd01100
Metabolic pathways
ntd01110
Biosynthesis of secondary metabolites
ntd01120
Microbial metabolism in diverse environments
ntd01230
Biosynthesis of amino acids
Module
ntd_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
ntd00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
EGO55_15540
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
EGO55_15540
Enzymes [BR:
ntd01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
EGO55_15540
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Gene cluster
GFIT
Motif
Pfam:
DAP_epimerase
PhzC-PhzF
Motif
Other DBs
NCBI-ProteinID:
AZI37200
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All DBs
Position
complement(3292341..3293150)
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AA seq
269 aa
AA seq
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MRVPFIKMHGLGNDFVVLDSRNQPLPPVDARKAAALADRRTGIGCDQLVLMENSAIADFR
MRIFNPDGSEVGACGNASRAVALLYGQACTIETGGGVIEAQLADAGIAVNMGLPRFDWDI
IPLAYAMDTLSMPVGWEELENPVAVNVGNPHVVFFVSDTDAVELDRLGPVIENDPLFPER
VNVNVATVTDRGAMRLRVWERGAGLTRACGTGACASAIAAMRRGLVDRSVAVTLPGGTLT
IAWGEDGTITMTGPATESFRGDFEWDALA
NT seq
810 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgttcctttcatcaagatgcacggtcttggcaacgacttcgtggtgctggacagc
cgtaaccaacccttgccgccggtcgacgcgcgcaaggcagccgcgctggccgatcgccgc
acgggcatcggatgcgaccagttggtgctgatggaaaacagcgcaatcgcggatttccgc
atgcggattttcaatccggatggcagtgaagtcggcgcctgcggcaatgccagccgcgcc
gtggcgctgctttacggacaggcctgcactatcgaaacgggtggcggggtgatcgaagcg
cagctggcagacgccggaattgcggtgaacatggggctgccccgtttcgactgggatata
atcccgctcgcctatgcgatggataccctgtcgatgccggtcggctgggaagagctggaa
aacccggtcgcggtcaatgtcggcaatccacatgttgtgtttttcgtgtcggataccgac
gcggtcgaactcgaccggctcggcccagtgattgaaaacgatccgctgtttcccgaacgg
gtcaatgtcaatgttgcaacagtgacggatcgcggtgcgatgcgcctgcgcgtgtgggaa
cgtggcgctgggctgacccgtgcctgcgggaccggtgcctgcgccagcgcgatcgcagcc
atgcggcgtgggctggtggatcgcagtgttgcggttaccctgccgggcggcacgctcact
atcgcgtggggtgaagacggcaccatcaccatgaccgggcccgcaacagaatcgttccgg
ggcgacttcgaatgggacgcgctcgcatga
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