Caenibius tardaugens: EGO55_15685
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Entry
EGO55_15685 CDS
T05741
Symbol
rnd
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
ntd
Caenibius tardaugens
Brite
KEGG Orthology (KO) [BR:
ntd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ntd03016
]
EGO55_15685 (rnd)
Enzymes [BR:
ntd01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
EGO55_15685 (rnd)
Transfer RNA biogenesis [BR:
ntd03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
EGO55_15685 (rnd)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
HRDC
Motif
Other DBs
NCBI-ProteinID:
AZI37229
UniProt:
U2YHD8
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All DBs
Position
complement(3324080..3325273)
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AA seq
397 aa
AA seq
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MKIHKLITKTEELADLCSRLAKAEFVAVDTEFMRENTYWPELCLVQIADQNEAAAIDPLA
QGLDMTPLLDLLTNNEDVLKIFHAGGQDVEIIYNLTGKTPHPIFDTQIAMMAISQSEQIG
YANLVESWLGLTIDKGARFTDWSRRPLTDRQIEYAIGDVTHLAKIFPRMLKRLIKTGRGE
WLDIEMESLADPENYRNDPSRAWRKIRAPSRNPQVLGRLKAIAGWRELEAQDKDIPRGRI
MRDETLADLASNPPAKQAELSKVRGLSQAWSENEIGKRLMRTLRDAEPLPHDEMPAKTPR
GAPLGKEGALVADLLKLLLKIRAREIDVAARLLTRSDELEALAAGVRNLPVLNGWRFEMF
GRDALELVEGRLAFAVTDGKLQMTHIDDTADSMAETE
NT seq
1194 nt
NT seq
+upstream
nt +downstream
nt
atgaagatacacaagctcattacgaagaccgaagaacttgccgatctctgcagccgcctt
gccaaggcggaattcgtagcggtcgacacggagttcatgcgcgagaacacgtattggccg
gaattgtgcctcgtgcaaatcgccgaccagaacgaagcagcggccatcgaccccttggcg
cagggcctcgatatgacgccccttctcgacctgctgaccaacaatgaagatgttttgaag
atcttccatgctggcggtcaggacgttgaaataatttacaatcttacgggaaaaacgcca
cacccgatcttcgatacgcagatcgcgatgatggctatcagccagtcagaacagatcggc
tacgcgaatctcgtcgaaagctggctgggcctgacgatcgacaagggcgcgcggtttacc
gactggtcccgccgcccgctgaccgatcgccagatcgaatatgccatcggcgatgtcacc
catctggcgaagattttcccgcgcatgctgaagcggctgatcaagaccggacgtggcgaa
tggctcgacatcgaaatggaatcgctggccgatccggaaaattatcggaacgacccatcg
cgtgcatggcgcaagattcgcgcgcccagccgcaacccgcaagtgctggggcggctcaag
gccatcgccggctggcgagagcttgaagcgcaggacaaggatatcccgcgcgggcgaatc
atgcgtgatgagactctggccgacctcgccagcaatcccccggcgaaacaggcggagttg
tccaaggtgcgcggcctgtcgcaggcgtggagcgaaaacgaaatcggcaagcgcctgatg
cgcacgctgcgcgatgccgaacccctgccccatgacgaaatgcccgccaagacaccgcgc
ggcgcgcctttgggcaaggaaggcgcgctggtggcggatcttctcaagctgctgctcaag
atcagggctcgggaaattgacgttgccgcgcgcctgctgacccgcagcgatgaactcgag
gccctggcggcgggtgtccgcaacctgcccgtcctgaatggatggcgctttgaaatgttc
ggcagggatgcgctggaactggtcgaagggcgattggcatttgccgtaaccgacggcaag
ctgcagatgacccacattgatgatacggcagacagtatggctgaaaccgaatga
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