Caenibius tardaugens: EGO55_16180
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Entry
EGO55_16180 CDS
T05741
Name
(GenBank) hypothetical protein
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
ntd
Caenibius tardaugens
Pathway
ntd00040
Pentose and glucuronate interconversions
ntd01100
Metabolic pathways
ntd02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
ntd00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
EGO55_16180
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
EGO55_16180
Enzymes [BR:
ntd01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
EGO55_16180
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GFIT
Motif
Pfam:
Pectate_lyase_4
Motif
Other DBs
NCBI-ProteinID:
AZI37321
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Position
3435360..3436595
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AA seq
411 aa
AA seq
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MAPRQDAAMMRRMMFAPALALATTPLSGSVSAPWPVAAAAAGATAAAQARCAAEGTVVQG
GKVMDARIYRAMTGFAAQGGTTGGLGRTRFVVTRADDPQGKGAPGTLRDAAARAAAAGGG
WIAFAPALAGKTITLTAPLRLGSNITVDGGCAAPMVTGQFRGSLVYLAGSRNVVMTRLSL
QHAGPGTQGDCITVSHGADRIWLAYMRLRQCHDGLIDVTRDGNPGAMRVTISNNQFLDHD
KAMLIVGGPVGPSCALSSNPVQVTVYRNMFLRTGQRHPRVSGDAFVDLAQNVVAFSPRQR
AGGQTGGAYGTLATNGARVLIDGTAYVPPAGKKHYRIASNRAGNEDKASDARCSQGELEW
EGSRPAGQAITAATGPAKLARMRPYRLPDLGTRAAPAMIRDLETRTGPSGI
NT seq
1236 nt
NT seq
+upstream
nt +downstream
nt
atggcgccacgtcaggatgccgcaatgatgcgccgcatgatgtttgcccctgcgctggcg
ttggccacgacaccgctatccggctccgtcagcgcgccatggcccgtggcggcggcggcc
gcgggcgccacggcggcagcgcaggcgcgctgtgcggcggaagggacagtagtgcagggc
gggaaggtcatggacgcccgcatctatcgcgcgatgactggctttgccgcgcaaggcggt
acgaccggcggactgggccgcacgcggtttgtggtgacccgggctgacgatccgcaaggc
aagggtgcgcctggcaccttgcgcgacgcggcggcacgagccgctgcggcgggtggcggc
tggattgccttcgcccctgcattggcaggcaagacgatcactttgacagcgcccttgcgg
cttggttccaatatcacggtggacggcggctgcgctgcgcccatggtgaccgggcaattt
cgcggttcgctggtctatctggctggcagccgcaacgtggtgatgacgcggctgtcgctg
cagcatgcggggccaggcacgcagggcgattgcatcacggtcagccatggtgcggatcgt
atatggctggcctatatgcgcttgcggcagtgtcatgacgggttgatcgatgtcacgcgg
gatggaaatcccggagccatgcgggtgacgatttccaacaaccagtttctcgaccatgac
aaggcgatgctgattgtcggagggccggtcggcccttcctgcgcgctgtcgtcaaatccg
gttcaggtcacggtttatcgcaacatgttcctgcgcaccgggcaacggcacccccgggtc
agcggcgatgcctttgttgaccttgcccagaatgttgtcgcgttttccccgcgccagcgg
gccggggggcaaacgggcggcgcatacggcacactggcgacgaatggtgcccgcgtgctc
atcgatgggacggcgtatgtcccaccggcgggaaagaagcactatcgtatcgcctcgaac
cgcgcgggtaacgaggataaagcatcggatgcgcggtgcagccaaggcgaactggagtgg
gaaggcagccgccccgccgggcaggccattacggccgccacaggccccgcaaagctggcg
cggatgcggccctatcgcttgcccgatctcggaacccgtgccgccccggcgatgatccgc
gatctggaaaccagaaccggcccttccggcatctga
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