Neurospora tetrasperma: NEUTE1DRAFT107425
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Entry
NEUTE1DRAFT107425 CDS
T03451
Symbol
NEUTE1DRAFT_107425
Name
(RefSeq) hypothetical protein
KO
K13025
ATP-dependent RNA helicase [EC:
5.6.2.7
]
Organism
nte
Neurospora tetrasperma
Pathway
nte03013
Nucleocytoplasmic transport
nte03015
mRNA surveillance pathway
nte03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
nte00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
NEUTE1DRAFT107425 (NEUTE1DRAFT_107425)
09122 Translation
03013 Nucleocytoplasmic transport
NEUTE1DRAFT107425 (NEUTE1DRAFT_107425)
03015 mRNA surveillance pathway
NEUTE1DRAFT107425 (NEUTE1DRAFT_107425)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nte03019
]
NEUTE1DRAFT107425 (NEUTE1DRAFT_107425)
03041 Spliceosome [BR:
nte03041
]
NEUTE1DRAFT107425 (NEUTE1DRAFT_107425)
03009 Ribosome biogenesis [BR:
nte03009
]
NEUTE1DRAFT107425 (NEUTE1DRAFT_107425)
03012 Translation factors [BR:
nte03012
]
NEUTE1DRAFT107425 (NEUTE1DRAFT_107425)
Enzymes [BR:
nte01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
NEUTE1DRAFT107425 (NEUTE1DRAFT_107425)
Messenger RNA biogenesis [BR:
nte03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
NEUTE1DRAFT107425 (NEUTE1DRAFT_107425)
mRNA cycle factors
Stress granule specific factors
NEUTE1DRAFT107425 (NEUTE1DRAFT_107425)
Spliceosome [BR:
nte03041
]
Complex C
Other components
EJC/TREX
NEUTE1DRAFT107425 (NEUTE1DRAFT_107425)
Ribosome biogenesis [BR:
nte03009
]
Eukaryotic type
90S particles
Helicases
NEUTE1DRAFT107425 (NEUTE1DRAFT_107425)
Translation factors [BR:
nte03012
]
Eukaryotic type
Initiation factors
eIF-4
NEUTE1DRAFT107425 (NEUTE1DRAFT_107425)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
Cas3-like_C_2
AAA_30
AAA_22
TniB
COG4_N
Flavi_DEAD
Motif
Other DBs
NCBI-GeneID:
20822335
NCBI-ProteinID:
XP_009848036
JGI:
Neute_matA2_107425
UniProt:
F8MES5
LinkDB
All DBs
Position
Unknown
AA seq
400 aa
AA seq
DB search
MADGGIDRKADEKIQFSTSKEVTVHPTFESMSLKESLLRGIYAYGYESPSAVQSRAIVQI
CKGRDTIAQAQSGTGKTATFSISMLQVIDTAVRETQALVLSPTRELATQIQSVVMALGDY
MNVQCHACIGGTNVGEDIRKLDYGQHIVSGTPGRVADMIRRRHLRTRHIKMLVLDEADEL
LNQGFREQIYDVYRYLPPATQVVVVSATLPYDVLDMTTKFMTDPVRILVKRDELTLEGLK
QYFIAVEKEDWKFDTLCDLYDTLTITQAVIFCNTRRKVDWLTDKMREANFTVSSMHGDMP
QKERDSIMQDFRQGNSRVLISTDVWARGIDVQQVSLVINYDLPSNRENYIHRIGRSGRFG
RKGVAINFVTSEDVRILRDIELYYSTQIDEMPMNVADLIS
NT seq
1203 nt
NT seq
+upstream
nt +downstream
nt
atggctgacggcggaatcgatcgcaaggccgatgaaaagattcagttctccacctccaag
gaggtaacggttcatccgactttcgagtcgatgtccttgaaggagagcctccttcgcggt
atctacgcctacggatatgagtccccctctgccgtccagtcccgcgccatcgttcagatc
tgcaagggtcgcgataccatcgcccaggcccagtccggtaccggtaaaacagccactttc
tcgatctctatgcttcaggtcatcgacaccgccgtgcgcgagacccaggccctcgtcctt
tccccgacccgcgaacttgcgacccagattcagagcgttgtgatggctttgggagattac
atgaacgttcaatgccatgcttgcattggtggcaccaacgtcggagaggatattcgcaag
ctcgactatggtcaacacattgtctctggcactcctggtcgtgttgccgacatgattcgc
cgccgtcatctccgcaccagacacatcaagatgctggttctcgatgaagccgatgagctc
ctcaaccagggtttccgcgagcagatctacgatgtgtaccgctatcttccgcctgccaca
caagtcgttgtcgtctctgccaccctcccttatgatgtgctcgacatgaccaccaagttc
atgaccgacccagttcgtatcctggtcaagcgtgacgagttgacgctcgagggtctgaag
cagtacttcattgctgtggagaaggaggactggaagtttgatactctttgcgatctctac
gacactctaactattacacaagccgttattttctgcaacacccgccggaaggtcgactgg
ttgaccgacaaaatgcgcgaagccaacttcactgtcagcagcatgcacggcgatatgcct
cagaaggagagagacagcattatgcaggatttcagacagggcaatagcagagtgcttatc
tcgaccgatgtgtgggcccgcggtatcgatgttcagcaggtcagcttggttatcaactat
gatcttcccagcaaccgtgaaaactacattcatcggatcggtcgttcgggtagattcggt
cgcaagggtgttgccatcaacttcgttactagcgaggatgtccgcatcttgcgtgatatc
gagttgtactactcgacccagattgatgagatgcccatgaatgttgccgaccttatctcc
taa
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integrated database retrieval system
