KEGG   Neurospora tetrasperma: NEUTE1DRAFT110529
Entry
NEUTE1DRAFT110529 CDS       T03451                                 
Symbol
NEUTE1DRAFT_110529
Name
(RefSeq) hypothetical protein
  KO
K03017  DNA-directed RNA polymerase II subunit RPB9
Organism
nte  Neurospora tetrasperma
Pathway
nte03020  RNA polymerase
nte03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:nte00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    NEUTE1DRAFT110529 (NEUTE1DRAFT_110529)
  09124 Replication and repair
   03420 Nucleotide excision repair
    NEUTE1DRAFT110529 (NEUTE1DRAFT_110529)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:nte03021]
    NEUTE1DRAFT110529 (NEUTE1DRAFT_110529)
   03400 DNA repair and recombination proteins [BR:nte03400]
    NEUTE1DRAFT110529 (NEUTE1DRAFT_110529)
Transcription machinery [BR:nte03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     NEUTE1DRAFT110529 (NEUTE1DRAFT_110529)
DNA repair and recombination proteins [BR:nte03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      NEUTE1DRAFT110529 (NEUTE1DRAFT_110529)
SSDB
Motif
Pfam: Zn_ribbon_RPB9 DUF1462 Zn_ribbon_Nudix
Other DBs
NCBI-GeneID: 20822519
NCBI-ProteinID: XP_009851450
JGI: Neute_matA2_110529
UniProt: F8MLJ9
LinkDB
Position
Unknown
AA seq 231 aa
MSSPAPSSTGGAKEKKPLEQITFRFCSECSNMLYPREAEDENKLLFTCRTCNFSEPATST
CIYRNILNNAAGETAGVTQDVASDPTVGVVSSVSSAAVGDGVASPASTLPRPADGSTYIY
CQCCGVIELCSNHFAAPPSDSEAGSDCESLYDQMAATTIDMNDNSHVWASNNSSEREAMG
RVRAEEYFYNLVAFEDYEEEEGSIEFENMELDDTDMDMTASSQLPVQVPAA
NT seq 696 nt   +upstreamnt  +downstreamnt
atgtcgtcgcccgccccttctagcaccggtggcgccaaggagaagaagccccttgagcag
atcacgttccgcttctgctccgaatgcagcaacatgctgtacccccgcgaggccgaagac
gaaaacaagctgctcttcacctgccgcacctgcaacttttccgagcccgccacgtcgacg
tgcatctaccgcaacatcctcaacaacgctgccggcgagacggctggtgtcacgcaagat
gtcgcctctgatcccacggtgggtgttgtctcttctgtttcttctgctgctgttggtgat
ggtgtcgcctcgcctgcgtcgaccttgccccgacccgcggacggatcgacctacatctac
tgccagtgctgtggcgtcattgagctgtgttcgaaccactttgccgcccctccctccgac
tccgaagccggcagcgattgcgagtccctgtacgaccagatggccgctaccacgatcgac
atgaacgacaacagccatgtctgggcctccaacaacagcagcgagagggaggccatgggc
agggtccgtgccgaagagtacttttacaacttggtcgcctttgaggactacgaagaagag
gagggctccatcgagtttgaaaacatggagctcgacgacaccgacatggacatgacagca
tcaagccaactgcctgttcaagtcccggcagcttag

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