Neurospora tetrasperma: NEUTE1DRAFT120422
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Entry
NEUTE1DRAFT120422 CDS
T03451
Symbol
NEUTE1DRAFT_120422
Name
(RefSeq) hypothetical protein
KO
K10570
DNA excision repair protein ERCC-8
Organism
nte
Neurospora tetrasperma
Pathway
nte03420
Nucleotide excision repair
nte04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
nte00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
NEUTE1DRAFT120422 (NEUTE1DRAFT_120422)
09124 Replication and repair
03420 Nucleotide excision repair
NEUTE1DRAFT120422 (NEUTE1DRAFT_120422)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
nte04121
]
NEUTE1DRAFT120422 (NEUTE1DRAFT_120422)
03400 DNA repair and recombination proteins [BR:
nte03400
]
NEUTE1DRAFT120422 (NEUTE1DRAFT_120422)
Ubiquitin system [BR:
nte04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
NEUTE1DRAFT120422 (NEUTE1DRAFT_120422)
DNA repair and recombination proteins [BR:
nte03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
Cul4-CSA complex
NEUTE1DRAFT120422 (NEUTE1DRAFT_120422)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_CDC20-Fz
Beta-prop_RIG_2nd
WD40_Prp19
WD40_WDHD1_1st
WDR55
Beta-prop_WDR75_1st
Beta-prop_EML_2
NBCH_WD40
EIF3I
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
Motif
Other DBs
NCBI-GeneID:
20823958
NCBI-ProteinID:
XP_009848509
JGI:
Neute_matA2_120422
UniProt:
F8MDG7
LinkDB
All DBs
Position
Unknown
AA seq
310 aa
AA seq
DB search
MAESGRQPRLLAGVRVGGLGRVTNPESTLQPAFLWAHQAGPHWSTNTARLVGTFELGAKV
SSHATSPIAFHLLVACGTQRLGARLVDLPSSAAVQSLVSHGQINGSAAANLAVTWSLVHD
HIVASGSADGVARLWNIRRHTKVHNGPVNGLTWTDDGAYIVSAGHNRQFSLATTIRNDYN
GHMTMFVSPSRLTPRKKEFLFYPNKNGMLVTGLHEGTLIIRLRGMGPAVAATRQRGERTT
RNFLSSTNVADGICSGHSDGHIRAWTPQLEALDKEDESTSIEEATGARVKKRKVLDDVFR
TLMGRQVSFS
NT seq
933 nt
NT seq
+upstream
nt +downstream
nt
atggcggagagcggacggcaacctcgcttgctggctggggtacgggtcggcgggctcggg
cgggtcaccaacccggaatccactcttcaaccggcgttcctctgggctcatcaagccgga
ccacactggtctacaaatacggcacgcttggttggcacgtttgagctgggtgcaaaggtt
tcttcacacgccacctcacccatcgcctttcatctgcttgttgcttgcggaacacagcgt
ttgggcgcccggctcgtcgacctgccttcttcggctgccgtccagtctcttgtctctcat
ggccagataaatggctctgctgctgcgaacctggctgtgacctggtcacttgttcatgac
catattgtggccagcggatcagccgatggtgtcgcgcgtctctggaatatcaggcggcac
acgaaggtgcacaacgggccagtaaacggtttgacctggacagatgacggtgcgtacatt
gtgtctgcaggtcacaatcgccaattttctctggccacaaccatccgaaatgattacaat
ggacatatgacaatgtttgtctcgccttcacgacttactccacgaaagaaggagtttttg
ttctatccgaataagaatgggatgctggttacaggtttacatgagggtacccttattatc
aggctacgcggcatgggtcctgctgtggcagctactcgtcagaggggagaacgaacgacc
agaaactttctctccagcaccaatgtcgctgatggcatctgcagtggacattccgacgga
catatccgtgcctggacaccccagctagaggcccttgacaaggaagatgaaagcaccagt
atcgaagaggccactggagctcgagtgaagaagcgcaaagtgctggatgatgttttccga
accttgatgggtaggcaggtctcgttttcctga
DBGET
integrated database retrieval system