Neurospora tetrasperma: NEUTE1DRAFT121868
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Entry
NEUTE1DRAFT121868 CDS
T03451
Symbol
NEUTE1DRAFT_121868
Name
(RefSeq) hypothetical protein
KO
K14962
COMPASS component SWD2
Organism
nte
Neurospora tetrasperma
Pathway
nte03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
nte00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
NEUTE1DRAFT121868 (NEUTE1DRAFT_121868)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nte03019
]
NEUTE1DRAFT121868 (NEUTE1DRAFT_121868)
03036 Chromosome and associated proteins [BR:
nte03036
]
NEUTE1DRAFT121868 (NEUTE1DRAFT_121868)
Messenger RNA biogenesis [BR:
nte03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
NEUTE1DRAFT121868 (NEUTE1DRAFT_121868)
Chromosome and associated proteins [BR:
nte03036
]
Eukaryotic type
Histone modification proteins
HMT complexes
COMPASS/SET1 complex
NEUTE1DRAFT121868 (NEUTE1DRAFT_121868)
COMPASS/SET1 complex (yeast)
NEUTE1DRAFT121868 (NEUTE1DRAFT_121868)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_WDHD1_1st
WD40_Prp19
WD40
Beta-prop_EML_2
WD40_CDC20-Fz
Beta-prop_WDR75_1st
EIF3I
WD40_MABP1-WDR62_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
WD40_RFWD3
WDR90_beta-prop_4th
WDR55
Beta-prop_SPT8
WD40_MABP1-WDR62_1st
Beta-prop_EIPR1
Beta-prop_Vps41
Beta-prop_RIG_2nd
Beta-prop_TEP1_C
B-prop_COPA_B_2nd
Motif
Other DBs
NCBI-GeneID:
20824193
NCBI-ProteinID:
XP_009850564
JGI:
Neute_matA2_121868
UniProt:
F8MKL5
LinkDB
All DBs
Position
Unknown
AA seq
377 aa
AA seq
DB search
MSSTPMDIDEPGAGTPSLNVTRLLGPNGPSTSKISEVIKNFRPTKFFQRDDVKEGRPQPY
VLSIDFDDPGELCMTSESDETIQIYNVREGRHDKSLLSKKYGVKHAKFTHSSSGIIYAST
KQNDAIRYLATHDNTFIRYFEGHEASVTNIALHPGSDNFLSCSLDTTVRLWDLNSRNWVA
KFHLTNPTLAAWDPAGLVFAIALPASASILLYDYRNYVKPFKIIDVLKEKGPADADAVFR
GWTKLEFSNDGKHILLGTRTGGHFLFDAIDGNLKAYLRKPQGGTRRPAPGEADGGSGALE
SSGDCCFTPDGRYVVSGAAKDLLVWDTMQTPNSKVLEPNFLPQEGKKEPVLVQYNPRFNM
IATADKELMFWLPVSDL
NT seq
1134 nt
NT seq
+upstream
nt +downstream
nt
atgtcatcgacaccgatggacatcgacgagcccggcgcgggaacaccctccctgaacgtt
actcggttacttggacctaatgggcccagtacctccaagatcagcgaggtgatcaagaat
ttcaggccgacaaagttcttccagagagacgacgtgaaggagggtaggccccagccatac
gttctctcaatcgactttgacgaccctggcgagctttgcatgacgtctgaaagcgacgag
accatccagatatataacgttagggaaggtcggcatgataagagcttgctgagcaaaaag
tacggcgtcaagcatgcgaagtttacacattccagctcgggcatcatctatgcgagcacg
aagcaaaacgacgcaatccgctatctggcaacccacgacaatacgtttatccgatatttc
gaaggtcacgaggcctccgttaccaacatcgccctccatcccggctccgataactttctt
tcatgtagtcttgacaccacagtcaggctctgggacctcaatagcaggaactgggttgcc
aaattccacctcaccaatcccactttagcggcctgggaccctgccggtctcgtttttgcc
atcgccctaccagccagcgccagcattctcctttacgattaccgcaactacgtgaaaccg
ttcaagatcatcgacgttctgaaagagaaggggccagccgatgcggatgctgtcttcaga
ggctggacgaaactcgagttctccaacgacgggaagcatattcttttaggaacacggacc
ggaggacactttctctttgacgcaattgacgggaacctgaaggcgtacttgcgaaagccc
caaggcggcaccagacggccagcccccggcgaggctgatggtggaagcggtgcgctagag
agtagtggagactgttgctttacgccggatggacgatatgtcgtgtcgggcgcggccaag
gacctgttggtttgggacaccatgcaaactcccaacagcaaggtcctggaaccgaatttc
cttccccaggaaggaaagaaggaaccggtccttgtgcagtacaatccacgattcaacatg
attgccactgcggataaggagcttatgttttggcttccggtttccgatttatag
DBGET
integrated database retrieval system
