KEGG   Neurospora tetrasperma: NEUTE1DRAFT123085
Entry
NEUTE1DRAFT123085 CDS       T03451                                 
Symbol
NEUTE1DRAFT_123085
Name
(RefSeq) hypothetical protein
  KO
K12881  THO complex subunit 4
Organism
nte  Neurospora tetrasperma
Pathway
nte03013  Nucleocytoplasmic transport
nte03015  mRNA surveillance pathway
nte03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:nte00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    NEUTE1DRAFT123085 (NEUTE1DRAFT_123085)
  09122 Translation
   03013 Nucleocytoplasmic transport
    NEUTE1DRAFT123085 (NEUTE1DRAFT_123085)
   03015 mRNA surveillance pathway
    NEUTE1DRAFT123085 (NEUTE1DRAFT_123085)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:nte03019]
    NEUTE1DRAFT123085 (NEUTE1DRAFT_123085)
   03041 Spliceosome [BR:nte03041]
    NEUTE1DRAFT123085 (NEUTE1DRAFT_123085)
Messenger RNA biogenesis [BR:nte03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     NEUTE1DRAFT123085 (NEUTE1DRAFT_123085)
    TREX complex
     NEUTE1DRAFT123085 (NEUTE1DRAFT_123085)
Spliceosome [BR:nte03041]
 Complex C
  Other components
   EJC/TREX
    NEUTE1DRAFT123085 (NEUTE1DRAFT_123085)
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    NEUTE1DRAFT123085 (NEUTE1DRAFT_123085)
SSDB
Motif
Pfam: RRM_1 RRM_PARP14_3 RRM_occluded FoP_duplication
Other DBs
NCBI-GeneID: 20824409
NCBI-ProteinID: XP_009852171
JGI: Neute_matA2_123085
UniProt: F8MQF8
LinkDB
Position
Unknown
AA seq 249 aa
MSGKLDQSLDEILSTQRRGKSNARGRGGRRSAGGKPTNAAPAGGIQKNTKPARNAAKPAP
AKSAGLTGESKIVVSNLPKDVSEGQIKEYFQQAIGQVKRVELSYGPGGTSRGIAHITFHH
ADGATKAYNTLNGLLIDNRPVKVEVVVSNAELIPQPKSLTQRITQPKAQPKSAATVKHAA
NAPKGAAAAKPGSKKGPRRPRSARPAKKTVEELDSEMADYFESGTTDNATGAAPAAANGG
DAPMEDEIL
NT seq 750 nt   +upstreamnt  +downstreamnt
atgtccggaaagctcgaccagtctctcgacgagattctctccactcagcgccgcggtaag
tccaacgcccgcggccgtggaggccgccgctcggctggcggtaagcccaccaatgctgct
cccgctggcggtatccaaaagaacacaaagcccgctcgcaacgctgccaagccggcgccc
gcgaagagtgctggtcttaccggcgagagcaagattgtcgtcagcaacctgcccaaggac
gtttccgaaggccagatcaaggaatacttccagcaagctattggacaggtcaagagggtg
gaactttcgtatgggcccggaggcactagccgcggtattgctcatatcaccttccaccac
gccgatggtgctaccaaggcgtacaacactctcaacggtctcctgatcgacaaccgcccg
gtcaaggtcgaggtcgttgtttccaatgctgagttgatccctcagcccaagagcctgact
cagcgcatcacacagcccaaggcccagcccaagtctgccgccactgtcaagcatgccgcc
aacgcccccaagggtgctgctgctgctaagcctggcagcaagaagggtccccgtcgccct
cgtagcgcccgccctgccaagaagactgtcgaggaattggattctgagatggctgactac
ttcgagagtggcaccactgacaacgccaccggagccgcgccggccgctgccaacggtggt
gatgctcccatggaggatgagattctttga

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