Neurospora tetrasperma: NEUTE1DRAFT124150
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Entry
NEUTE1DRAFT124150 CDS
T03451
Symbol
NEUTE1DRAFT_124150
Name
(RefSeq) DNA mismatch repair protein msh6
KO
K08737
DNA mismatch repair protein MSH6
Organism
nte
Neurospora tetrasperma
Pathway
nte03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
nte00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
NEUTE1DRAFT124150 (NEUTE1DRAFT_124150)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nte03400
]
NEUTE1DRAFT124150 (NEUTE1DRAFT_124150)
DNA repair and recombination proteins [BR:
nte03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
NEUTE1DRAFT124150 (NEUTE1DRAFT_124150)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_II
MutS_IV
AAA_23
AAA_27
AAA_29
Motif
Other DBs
NCBI-GeneID:
20824584
NCBI-ProteinID:
XP_009853581
JGI:
Neute_matA2_124150
UniProt:
F8MRV0
LinkDB
All DBs
Position
Unknown
AA seq
1235 aa
AA seq
DB search
MGDRTSTPARTPARTQSNVKRSGLASTGRQSSILGFFSKAASSGTPTNAGANTNANANPT
IAASSPASGATATPRAGQKEKSPECLKESTKSNSILPPRRRKRLDETPVPSSDAVLPPSS
QENPGTAYSKDDDTRTIMMPTVVNYAESSDDDGDDVFLSFSGRPKSSRPSRSRSRPQVLD
EDDEDDAFELDDNVINEEEDDDMADFVVDDDESDQGPSKSKKRKRPAARPSAPRKKSAVS
SPPSPRRSSRQEEDDQDEEMMDDVPRTSTALKWKYDPDNIEPTEPRSATPRSAQTPSATK
PKPKAHTREPEERYPWLADIQDANRNRPGHPDYDPGSVYVPPSAWRQFSPFETQYWEIKK
NLWDTVVFFKKGKFYELYENDATIGHQLFDLKLTDRVNMRMVGVPESSLDMWVNQFVAKG
YKVARVDQMESALGKEMRERDTKAKKADKIIRRELTCILTGGTLVDGSMLQDDNAVYCAA
IKESVVDDKPAFGIAFVDAATGQFFISEFEDDVDLTKFETFVAQTSPRELILEKSHLSTK
ALRILKNNTSPTTIWNYLKPGTEFWDADVARREFDCSGYFVSGEGQEEVWPAKLKEARDK
DLLMSALGALTQYLRMLKLERNLLSQGNFAWYNPIHRNGTLILDGQSLINLEIFANTANG
GPEGTLFHLLNRCITPFGKRLFRQWVCHPLCNIQKLNERLDAVDMLNDDHSLREQFSSQM
SKMPDLERLISRIHAGACRPEDFVKVLEGFEQIDRTMELLESYGGGNGLVDRLIASMPDL
KEPLGYWKTAFDRKRARDDKLLIPEPGIEEDFDRSQAELDRIKGELQELLERQKTALRCK
TAKFTDVGKEVYQIEVPKTVKVPPKWRQMSATSAVKRYYFKELQDLVRELQEAEETHSQI
VKEVASRFFKRFDLDYETWLQAIRIISQLDCLISLAKASAALGQPCCRPLFVNDERTVVE
FNELRHPCMLNTVDDFIPNDIKLGGDEANISLLTGANAAGKSTILRMSCIAVIMAQIGCY
VPAVSARLTPVDRIMSRLGANDNIFAAQSTFFVELSETKKILSEATPRSLVILDELGRGT
SSYDGVAVAQAVLHHVASHIGCVGFFATHYHSLATEFENHPEIRARRMQIAVDEENKRIT
FLYKLEDGVAEGSFGMHCAAMCGIPDKVIRRSEVAAKEWEHTSRLKESLDRAKTGCYIPL
GVLSDVASLLRSEIGKEREVGDRGVEVLLRAIEAL
NT seq
3708 nt
NT seq
+upstream
nt +downstream
nt
atgggcgacagaacttcaactccggcgcgcaccccggcaaggacccagtccaacgttaag
agatctggactggcctcgacgggcaggcagtcgagtattctgggcttcttctccaaagct
gcctcctcggggactcccacgaacgcgggcgccaataccaatgccaatgccaatcccact
atcgccgcttccagtccagcttctggtgcgacagccacgcctcgcgctggccaaaaggaa
aagtcaccagaatgcctcaaggaatccacaaaatccaactcgattcttccgcccaggcgg
cggaaaagactcgacgaaacgccagtccctagtagtgacgccgttctacccccgagctcc
caggaaaacccaggcactgcctattccaaggatgatgacaccaggaccatcatgatgccc
acggttgtcaactatgccgagtcatcagacgacgacggcgacgatgtctttctctcgttt
tccgggagacccaaaagctctcgtccatcacgctctcgatcacgacctcaagtcttagac
gaggatgacgaagacgatgctttcgagctagacgacaatgtaatcaacgaggaagaagac
gatgacatggcggactttgtagtcgacgacgacgaatccgatcaagggccctcaaagtcc
aagaagagaaaacgaccggcagcacgcccgagcgccccacgcaaaaagtccgccgtatcc
tctccgcccagccctcgaagatcgtcaaggcaagaggaggatgaccaagatgaggagatg
atggatgatgttcccagaacctcaacagccctgaaatggaagtatgatccggacaacatt
gaaccaaccgaacctcgatcggccactcctcgttccgcacaaacaccatcagccaccaag
ccaaagccaaaggcacacacaagagagcctgaagagagatacccgtggttggccgatatc
caagatgcaaacaggaatcgaccaggacatcccgattacgatcctggctccgtctatgtg
cccccatctgcctggagacagttttcgccgtttgagacgcagtattgggagatcaagaag
aacttatgggacacagtggtcttcttcaaaaagggaaagttttacgaactctatgagaac
gatgccaccatcggacatcagctctttgacctcaagctcactgatcgtgtcaacatgcgc
atggttggcgttcccgagagttcgctagacatgtgggtcaaccaatttgtggccaaaggg
tacaaggttgcccgggtcgaccaaatggagtctgcgctgggcaaagagatgcgggaacgt
gacaccaaggctaagaaggcggacaagatcatccgccgcgagcttacttgcatccttaca
ggcggcaccttggtggacggtagcatgcttcaagacgacaatgccgtctactgtgcagcc
atcaaagagtccgtcgtggatgataagcctgcatttggcatagcctttgtagacgctgct
actggacagttcttcatctcagagtttgaggacgatgtcgacctgaccaagtttgagacc
ttcgtagcccagacctccccacgggaattgatcttggagaaatcgcatctgtctaccaag
gctttgcggattctcaagaacaacacgagtcccaccaccatttggaactatctcaagccg
ggaaccgagttttgggacgctgacgttgcgaggcgtgaatttgactgtagcggctacttt
gtgtctggcgaaggtcaggaggaggtctggcctgcgaagctcaaggaggctcgcgacaaa
gacctcttgatgtccgcactcggtgctctgactcagtatctgcgcatgctcaagttggag
cgtaacttgctctcccagggcaactttgcctggtacaaccctattcatcggaacggcaca
cttattcttgacggccagtctcttatcaacttggaaatctttgccaatacagccaatggc
ggccctgaaggaaccttattccatctgctgaacaggtgcataactcccttcggaaagcga
ctcttcaggcaatgggtctgccaccctctctgcaacatacagaagctcaacgagagactg
gatgccgttgatatgctcaatgacgaccacagccttcgggagcaattctcgtctcagatg
agcaaaatgccggacttggagcggttgatatcccggatccatgctggggcttgccgaccc
gaggactttgtcaaggtcttggaaggattcgaacagatcgaccgtactatggaactcctg
gagtcctatggtggtggcaatgggctggttgatcgtctcattgcttcaatgcctgacctc
aaggaacccttaggatactggaagaccgccttcgaccggaagagagcccgtgatgacaag
cttctgattcctgagccaggtatagaagaagactttgaccgcagccaagcagaactggac
cggattaaaggagagttgcaggagctgcttgaaaggcaaaagactgctctacgatgcaaa
accgcaaagttcaccgacgtcggcaaggaggtctaccagatcgaagtccccaaaacagtc
aaggttcctcccaaatggcgccaaatgtctgcaacatcggcggtcaagcggtactatttc
aaggagcttcaggaccttgttcgtgagctccaggaagcggaagaaacacattctcagatc
gtcaaagaagtcgcctcgcgattcttcaagcgcttcgacctcgattacgagacatggttg
caggcaattcgcatcatttcacaactagattgtctcatcagtctggccaaagcttcggcg
gcgcttggtcagccttgctgccgcccattgtttgtaaatgacgagcggaccgttgtcgag
ttcaacgaactacgccatccctgcatgctcaacaccgttgacgacttcatcccgaatgac
atcaagctgggtggtgatgaggcgaacattagccttcttaccggcgcgaacgctgctggc
aagtccacgattcttcgaatgtcctgcattgccgtgatcatggcccagattggttgttat
gtcccggctgtgtccgctcgtctgacccccgttgaccggatcatgtcccgtctgggcgca
aacgacaatatctttgctgcgcaatccacgttcttcgtcgagctgtcagagacaaagaag
atcctgtcagaggccacaccccgttcactcgttattcttgatgagctcggacgtggtaca
tcatcatacgatggtgtcgcagttgcccaggcagttctgcaccatgtcgcatcacacatt
ggttgcgtcggtttcttcgccacgcattatcacagtcttgctaccgagttcgagaatcat
cccgagatccgtgctaggagaatgcagatcgcagtggacgaggaaaacaagagaataaca
tttctgtacaagctcgaagacggcgttgcagagggctcctttggcatgcattgcgcagcc
atgtgtggtattcccgacaaggtgatccgaagatccgaggtcgctgcgaaggagtgggag
catacgagccggctgaaggagagtctggacagagcgaagacaggctgctatattccgctc
ggagtgctgagtgatgtggccagtcttctaaggagcgagattgggaaggagcgagaagtt
ggcgacaggggagtggaagtgcttttgcgggctattgaggctctttga
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