KEGG   Neurospora tetrasperma: NEUTE1DRAFT125898
Entry
NEUTE1DRAFT125898 CDS       T03451                                 
Symbol
NEUTE1DRAFT_125898
Name
(RefSeq) hypothetical protein
  KO
K14404  cleavage and polyadenylation specificity factor subunit 4
Organism
nte  Neurospora tetrasperma
Pathway
nte03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:nte00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    NEUTE1DRAFT125898 (NEUTE1DRAFT_125898)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:nte03021]
    NEUTE1DRAFT125898 (NEUTE1DRAFT_125898)
   03019 Messenger RNA biogenesis [BR:nte03019]
    NEUTE1DRAFT125898 (NEUTE1DRAFT_125898)
Transcription machinery [BR:nte03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Transcription termination factor
     NEUTE1DRAFT125898 (NEUTE1DRAFT_125898)
Messenger RNA biogenesis [BR:nte03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage and polyadenylation specificity factor (CPSF) complex
     NEUTE1DRAFT125898 (NEUTE1DRAFT_125898)
SSDB
Motif
Pfam: zf_CCCH_4 zf-CCCH Torus zf-CCCH_2 zf-CCCH_4 zf-CCCH_RBM22 zf-CCCH_9 zf-CCCH_DUS3L zf-CCCH_12 Activator_LAG-3 zf-CCCH_PARP12
Other DBs
NCBI-GeneID: 20824874
NCBI-ProteinID: XP_009856040
JGI: Neute_matA2_125898
UniProt: F8N1X4
LinkDB
Position
Unknown
AA seq 317 aa
MATTTQTTTNSLPSGAGGPQQLVTQMLNHTAPHYTFSFTPFLQRTYQHSLPADRPICKAY
ASGNCPLKSHCPERHVTTSSQNTHGGGNTFSGGFGSLVCKHWLRGLCKKGESCEFLHEYN
LRKMPECNFFVRNGYCSNGDECLYLHIDPLSRLPPCPHYERGFCPLGPRCDKKHFRRKLC
LYYLAGFCPDGKGCKEGAHPRWTADKDMEKPRAKGEGDQMLLQQQQQQQQQQHMGDANGM
GGGMAQATGANEYMDRERERDRDNREREMMMQGRDRDGGGHDRHKDRFGGGGGGGGGGRG
RGGWRGRGRGGFRGKGH
NT seq 954 nt   +upstreamnt  +downstreamnt
atggcgacaacaacacagacaacaacaaactccctcccctctggggcaggaggaccgcaa
caactcgtcactcagatgctcaaccacaccgcaccacactataccttctccttcacgccc
ttcctccagcgcacctaccagcactctctccccgccgaccgacccatctgcaaagcctac
gcctcaggcaactgcccgcttaaatcccactgccccgagcgccacgtcaccacgtcgtcc
caaaacacccatggcggcggtaacaccttcagcggcggcttcggctcgctcgtctgcaag
cactggctgcgcggcctctgcaaaaagggcgagtcgtgcgagttcctgcacgagtacaac
ctgcgcaagatgcccgagtgcaatttctttgtcaggaacgggtactgcagcaacggggac
gagtgtctgtatctgcacattgatccgctgtcgagattgccgccgtgtccgcattacgag
agggggttctgtccgctgggaccgcgatgtgacaagaagcattttcggaggaagctgtgc
ttgtattacctggcgggcttttgtccggatgggaagggctgcaaggagggcgcgcatccg
aggtggacggcggataaggacatggagaagccgagggcgaaaggggagggagatcagatg
ctgctgcagcaacagcagcagcaacaacagcaacaacatatgggcgatgctaatggtatg
ggtggtggaatggcgcaggcgacgggcgcgaatgagtatatggaccgagagagggagcgt
gatcgggataacagggagagggagatgatgatgcagggacgcgatagggacggtggcggg
catgatcgccataaggatcgctttggaggcggaggaggaggaggaggaggaggcagaggc
cgaggaggatggaggggaagaggaaggggaggattcaggggtaaaggtcattaa

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