Neurospora tetrasperma: NEUTE1DRAFT130968
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Entry
NEUTE1DRAFT130968 CDS
T03451
Symbol
NEUTE1DRAFT_130968
Name
(RefSeq) hypothetical protein
KO
K14402
cleavage and polyadenylation specificity factor subunit 2
Organism
nte
Neurospora tetrasperma
Pathway
nte03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
nte00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
NEUTE1DRAFT130968 (NEUTE1DRAFT_130968)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nte03019
]
NEUTE1DRAFT130968 (NEUTE1DRAFT_130968)
Messenger RNA biogenesis [BR:
nte03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
NEUTE1DRAFT130968 (NEUTE1DRAFT_130968)
U7-dependent histone pre-mRNA processing factors
NEUTE1DRAFT130968 (NEUTE1DRAFT_130968)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Lactamase_B_6
CPSF100_C
Beta-Casp
RMMBL
Lactamase_B
Motif
Other DBs
NCBI-GeneID:
20825488
NCBI-ProteinID:
XP_009852966
JGI:
Neute_matA2_130968
UniProt:
F8MSK4
LinkDB
All DBs
Position
Unknown
AA seq
1051 aa
AA seq
DB search
MDVELSFSRFHAQGSPGPSQKWGRDAAVSIAGRTPTPGLMEFLGDSHAYHHSFCPLQGAL
SDSSASQSLLELDGGVKILIDVGWDETFDVEKLKELGKQAPTLSLILLTHATVPHLAAYA
HCCKHFPPFQRIPVYATRPVIDLGRTLTQDLYASTPLAATTISSASLAEVSYASGYSQAA
SAENTFLLQPPTPEEITKYFSLIQPLKYSQPHQPLPSPFSPPLNGLTITAYNSGRTLGGT
IWHIQHGLESIVYAVDWNQARENVFAGAAWLGGNHGGAGGTQVIEQLRKPTALVCSSRTP
DAALPRAKRDEQLMESIKLCIARGGTVLIPVDSSARVLELSYLLEHAWRKEVAKDNDVFK
SAKLFLAGRTISSTMKNARSMLEWMDDSIIREFEAFADESRRNNRRDEGNHQTGPGPFDF
KYLRLLERKAQIDKILQQSDDAEPRAKVILASDTSLDWGFSKDILKSIAADARNLVILTE
KPNLEPNQKPSISRTLWEWWKERRDGVATERTSNGDTFEQVYAGNRELEIETAERKGLEG
DELNVYQQWLATQRQLQATLQSGGTNLLEAPGDVLDDADSDTDSESEGSDTEQQGKALNI
ANTMAQASRKKVVLRDEDLGVTILIKKENVYDFNVRGTKGRDRMFPVAMRRRRADEFGEL
IRPEDYLRAEEREDAENQEAGQVNANNQEPEGLGKKRKWEDIGTAGRGRGGAGPNKRPHH
HDRRRLSAGEADAAPFSENGPAGDDLSDLEDEEDETLNGPAKLVVTKETIPVRLRIAFVD
FSGLHDKRSLTMLIPLIQPRKLVLVAGGKDETLALASDVKKLLTAQSTGTESAIEVLTPA
VGTTVDASVDTNAWVLKLADPLVKGLKWQNVRGLGIVTVTGLLLPGGKFQPIEVGDGDGD
AAKRQKLEDSSETPTTSTALVKAGTNTSPTTASLPTLDLVPPTLASSLRSQAAQPLHVGE
LRLADLRRAMLSAGHKAEFRGEGTLLIDDVVVVRKSTAQGGRIELESVGLPSDTMPGTTS
GGLLDAAMKVGGTFYAVKKKIYEGLAVVAGA
NT seq
3156 nt
NT seq
+upstream
nt +downstream
nt
atggatgtcgagctgtccttttctcgtttccatgcgcaaggcagcccggggcccagccaa
aagtggggccgcgatgctgccgtgtcaatcgccggtcggacacccacccccggtctgatg
gagttcttgggcgactcccacgcttaccatcacagcttctgccctctccagggcgccctc
tccgactcgtcagcctcccagtcgctgctggagctcgacggcggcgtcaagatcctcatc
gatgtcggctgggacgagacctttgacgtcgaaaagctcaaggagctcggcaaacaagca
ccgactctgtccctcatcctcctcacccacgccaccgtcccccatctggccgcctacgcc
cactgctgcaagcacttcccacccttccagcgcattcccgtctatgcgacgcgccccgtc
attgatctcggccgtaccctgacgcaggatctctatgcctcgacacccctggctgccacc
accatatcatcggcctcgctcgccgaagtgtcgtatgcctcgggatactcccaggccgcc
tccgccgaaaacaccttcctcctccagccacccactcccgaggagatcacaaagtacttc
tctctaatccagcctttaaagtactctcagccacatcaaccgctgccgtcgcccttctcc
ccgcctctgaacggactcaccattaccgcctacaactcgggccgcaccctcggaggaacc
atatggcacattcagcatggcttggagtcgattgtctacgccgtcgactggaaccaggcc
cgtgagaacgtgtttgccggcgctgcttggttaggtggaaaccatggtggtgccggaggt
acacaggtgattgagcagctgcgcaagccaaccgccctagtatgcagcagtcgtactcca
gacgccgccctaccgcgtgccaagcgtgatgaacaacttatggagtcaatcaagctgtgt
attgccagaggtggtaccgtccttatccccgtcgactcgagcgccagagtattagagcta
tcataccttctcgagcacgcctggagaaaagaggtcgccaaggacaatgacgtcttcaaa
tccgccaagctgttccttgccggacgcaccatcagcagcaccatgaagaatgccaggagt
atgctggagtggatggacgacagcatcatcagagagtttgaagcctttgcggatgaatcg
aggaggaataacaggagggatgagggtaatcaccagacagggccaggaccattcgacttc
aaatacttgaggctacttgagcgcaaggcacagatcgacaagatcctgcaacagtcggac
gatgccgaaccaagagccaaggttattctcgccagcgacacgagcctggactggggtttc
tccaaggatatcctcaagtccattgccgctgatgcgcgcaacttggtcattctaacggaa
aagcccaacttggagccgaaccaaaaaccatctatttcgaggacactatgggagtggtgg
aaagagaggagggacggtgtggcgacagaacgcacaagcaacggtgacacattcgagcag
gtctatgccggtaaccgcgagttggagattgaaaccgccgaacgaaaggggcttgaaggt
gatgagctgaacgtgtatcaacaatggctggcaacccaacggcagctacaagctacccta
cagagcggtggcaccaatctattagaagcaccgggagacgtccttgacgacgctgattcc
gacaccgatagcgagtcagaaggctccgatacggagcaacaaggaaaggctctaaatatc
gcaaacacaatggcccaagcaagtcgtaagaaggtagtattgagggacgaggaccttggt
gtcaccatcctcatcaagaaagaaaacgtctacgacttcaatgtccgcggcaccaagggc
agagaccgcatgttccccgtcgccatgcgtaggagacgtgccgacgaatttggcgaactc
atccgacccgaagactacctccgcgctgaggaacgcgaagacgccgagaaccaagaagcc
ggccaagtaaacgccaacaaccaagagcccgaaggccttggcaagaagcgcaagtgggaa
gacatcggcaccgccggcagaggcagaggcggcgcggggcccaacaaacgtccccaccac
cacgaccgccgtcgcctttccgcaggcgaagccgacgctgctcccttttccgagaacggc
ccagcgggcgatgacctctccgatctcgaagacgaagaggacgagaccctcaacggcccc
gccaagctggtagtcaccaaggaaactattcccgtccgtctgcggattgcctttgttgac
ttcagcggcctccacgataagcgcagcttgaccatgctcatcccgctcatccagccgcgc
aagctggtcctcgtcgccggcggcaaagacgagaccttggccctggcctcggacgtcaag
aagttgctcaccgcccaatccactggtaccgagtccgccatcgaggtgctcacccccgca
gtgggcacaaccgttgacgcctcggtcgacaccaacgcctgggtcctgaaactagccgac
ccgctcgtcaagggcctcaaatggcagaacgtgcgcggtctgggaatcgtcactgtcacc
ggtctgctactccccggaggcaaattccagccgatcgaggtgggcgatggcgatggcgat
gcagcaaagcgccagaaactagaagactcttcggaaactccaacaacttccaccgccctg
gtaaaagccggcaccaacacctcccccaccaccgcctccctccccacactggacctcgtc
ccgccaactctggcctcctcgttacgttcacaagccgcccaacctctacacgtaggcgaa
ctacgtctcgccgacttgcgtcgggccatgctaagcgcaggccacaaggccgagttcagg
ggagaaggaacgctgttgattgacgatgtggtggttgtgcgcaaatcaacagctcaggga
ggcaggatcgagttggagagcgtggggttgccgagtgataccatgccgggcacgacgagt
ggtggattgttggatgcggccatgaaagtgggtggcacgttctatgcggttaagaagaag
atttatgagggcttggctgttgttgctggggcttga
DBGET
integrated database retrieval system
