Neurospora tetrasperma: NEUTE1DRAFT144139
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Entry
NEUTE1DRAFT144139 CDS
T03451
Symbol
NEUTE1DRAFT_144139
Name
(RefSeq) hypothetical protein
KO
K10755
replication factor C subunit 2/4
Organism
nte
Neurospora tetrasperma
Pathway
nte03030
DNA replication
nte03410
Base excision repair
nte03420
Nucleotide excision repair
nte03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
nte00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
NEUTE1DRAFT144139 (NEUTE1DRAFT_144139)
03410 Base excision repair
NEUTE1DRAFT144139 (NEUTE1DRAFT_144139)
03420 Nucleotide excision repair
NEUTE1DRAFT144139 (NEUTE1DRAFT_144139)
03430 Mismatch repair
NEUTE1DRAFT144139 (NEUTE1DRAFT_144139)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
nte03032
]
NEUTE1DRAFT144139 (NEUTE1DRAFT_144139)
03036 Chromosome and associated proteins [BR:
nte03036
]
NEUTE1DRAFT144139 (NEUTE1DRAFT_144139)
03400 DNA repair and recombination proteins [BR:
nte03400
]
NEUTE1DRAFT144139 (NEUTE1DRAFT_144139)
DNA replication proteins [BR:
nte03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
NEUTE1DRAFT144139 (NEUTE1DRAFT_144139)
DNA Replication Termination Factors
ELG1-RFC complex
NEUTE1DRAFT144139 (NEUTE1DRAFT_144139)
Chromosome and associated proteins [BR:
nte03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
NEUTE1DRAFT144139 (NEUTE1DRAFT_144139)
DNA repair and recombination proteins [BR:
nte03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
NEUTE1DRAFT144139 (NEUTE1DRAFT_144139)
Check point factors
HRAD17(Rad24)-RFC complex
NEUTE1DRAFT144139 (NEUTE1DRAFT_144139)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
AAA_14
AAA_16
AAA_22
nSTAND3
Viral_helicase1
RCF1-5-like_lid
RuvB_N
DNAX_ATPase_lid
AAA_3
Mg_chelatase
AAA_assoc_2
Rad17
NTPase_1
AAA_11
Gp44_lid
MeaB
AAA_19
KTI12
AAA_24
Motif
Other DBs
NCBI-GeneID:
20826408
NCBI-ProteinID:
XP_009847990
JGI:
Neute_matA2_144139
UniProt:
F8MEF5
LinkDB
All DBs
Position
Unknown
AA seq
357 aa
AA seq
DB search
MPSAKAEERGESSTSISKAATSVSASSSPTYELPWVEKYRPVFLDDVVGNTETIERLKII
AKEGNMPHFIISGMPGIGKTTSVLCLARQLLGDAYKEAVLELNASDERGIEVVRQRIKGF
AQKKVTLPPGRHKIVILDEADSMTSGAQQALRRTMEIYSNTTRFAFACNQSNKIIEPLQS
RCAILRFAKLTDAQVVKRLLQIIEAEKVEYSDDGLAALVFSAEGDMRQAINNLQSTHAGF
GFVSGDNVFKVVDSPHPIKVQAMLKACYEGNVDAALDGLRELWDLGYSSHDIISTMFKVT
KTIPTLSEHAKLEFIKEIGFTHMKILEGVQTLLQLSGCVARLCKLNMDPKKFVAPKK
NT seq
1074 nt
NT seq
+upstream
nt +downstream
nt
atgccatcagccaaagcagaggagaggggcgagtcctcaacctccatctccaaggcagca
acctcggtctccgcgagctcttccccgacctacgagctaccatgggtagaaaagtacaga
ccagtcttccttgacgatgtggtcggtaacacagaaacgatcgagcgcctcaagattatc
gcaaaggagggcaacatgccccatttcattatttcaggcatgcctggtatcggcaagacc
acgagtgttttgtgtctggcaaggcaattactgggtgatgcgtacaaggaggcggtgctg
gagttgaatgccagtgacgagcgaggcattgaagtagttcgccagcgcattaaaggcttc
gcccagaagaaagttaccctccccccaggtcggcacaagatcgtaatcctcgacgaagcc
gacagcatgacctcgggcgctcaacaagcgcttcgccgcacaatggaaatctactccaac
accacacgctttgccttcgcctgcaaccaatccaacaagatcatcgaacctttgcaatcc
cgctgcgcaatcctgcgcttcgccaagctcaccgacgcgcaagtcgtcaaacgcctgctg
caaatcatcgaagccgaaaaagtcgagtacagcgacgacggcctggccgcgctggtcttc
agcgccgagggagacatgcggcaggcgattaataacttgcaatctacacacgccggcttc
ggcttcgtgagcggggataatgtctttaaagttgtggatagcccgcacccgatcaaggtg
caggcgatgctcaaggcctgctacgagggtaatgttgatgcggccctggacgggctgcgg
gagctgtgggacctggggtattccagtcatgatattatcagcaccatgttcaaggtcaca
aagacgattccgacgctgagcgagcacgctaagctcgagtttatcaaggagattgggttt
acgcatatgaagattttggagggcgtccagacactgttgcagttgagcgggtgcgtggcg
aggttatgtaagttgaacatggatccgaagaagtttgtggcaccaaagaagtga
DBGET
integrated database retrieval system
