Neurospora tetrasperma: NEUTE1DRAFT145530
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Entry
NEUTE1DRAFT145530 CDS
T03451
Symbol
NEUTE1DRAFT_145530
Name
(RefSeq) hypothetical protein
KO
K12867
pre-mRNA-splicing factor SYF1
Organism
nte
Neurospora tetrasperma
Pathway
nte03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
nte00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
NEUTE1DRAFT145530 (NEUTE1DRAFT_145530)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nte03019
]
NEUTE1DRAFT145530 (NEUTE1DRAFT_145530)
03041 Spliceosome [BR:
nte03041
]
NEUTE1DRAFT145530 (NEUTE1DRAFT_145530)
Messenger RNA biogenesis [BR:
nte03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
NEUTE1DRAFT145530 (NEUTE1DRAFT_145530)
Spliceosome [BR:
nte03041
]
Complex B
Other components
Prp19-related factors
NEUTE1DRAFT145530 (NEUTE1DRAFT_145530)
Complex C
NEUTE1DRAFT145530 (NEUTE1DRAFT_145530)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HAT_Syf1_CNRKL1_C
HAT_Syf1_M
HAT_Syf1_CNRKL1_N
HAT_PRP39_N
HAT_PRP39_C
TPR_14
Suf
TPR_15
Mad3_BUB1_I
TPR_8
RPN7
NRDE-2
ARM_TT21_C
Motif
Other DBs
NCBI-GeneID:
20826596
NCBI-ProteinID:
XP_009849760
JGI:
Neute_matA2_145530
UniProt:
F8MH21
LinkDB
All DBs
Position
Unknown
AA seq
829 aa
AA seq
DB search
MSILSRVSDRRPDLSLVSEEDFPYEQDIVRNPGSTKPWLAYIEYKLQKGTVQEQAYIMER
ACVQLPRSYKLWKMYLRFRTKHVSKLNAAIFATEYQKVNSLFERALILLNKMPRIWEMYL
KFLMQQPLVTHTRRTFDRALRALPITQHNRIWALYRPFANSAEGETAVKIWRRYMQVHPE
DAEDFIELLVAVGLYTEAVHKYIEILNNPRFTSKNSKGHYELWSEMVDLLVEHATAVETG
HETGIDVERIIRSGIERFADQRGKLWCGLATYWIRRGSFERARDVFEEGITTVMTVRDFT
LVFDSYTEFEESIISALMEMASTRAEKGEVDEVADFDLDIRMMRFEHLMDRRPFLLNDVL
LRQNPNNVTEWEKRVALWGDNKEEVVKTYLDAIEAIQPKKAVGALHQLWTNYAKFYEAGG
DLSSARRIMEKAVKVPYKSVAELADMWIEWAEMELRNKCFDEAMKVMAKAVQAPKRSTVD
YFDETLSPQQRVHKSWKLWSFYVDLVESVSSLDETRKVYERIFELRIATPQTVVNYANLL
EEHKYFEESFKIYERGLDLFSYPVAFELWNLYLTKAVDRKISIERLRDLFEQAVEDCPPK
FAKVIYLMYGNLEEERGLARHAMRIYERATRAVADEDRADMFNFYITKSASNFGLPSTRP
IYERAIAALPDAEARDMCLKFADMEKRLGEIDRARAIYGHASQFCDPRTNPGFWTKWDQF
EVQHGNEDTYKEMLRIKRSVQAQYNTDVNFIASQALARSQQKRMEEEAAGNGGGEMDAEV
ADAMAQLERQARAPVGFVAASEGPKGGSMPVQPVEVHNPDAIDLDEMDE
NT seq
2490 nt
NT seq
+upstream
nt +downstream
nt
atgtctatcctttcacgcgtctccgaccgtcgcccagacctctccttggtcagcgaggag
gactttccctacgaacaagacatcgtccgtaaccccggcagcacgaagccatggcttgcc
tatatcgagtacaagcttcagaaagggacggttcaggagcaggcatatatcatggagcgc
gcctgtgtgcagcttcctcgatcctataagctttggaagatgtacctccggttcaggacg
aagcacgtttcgaagctcaatgccgcgatctttgccacggagtaccaaaaggtcaacagc
ctctttgagcgggcactcattctcctcaacaagatgcctaggatatgggagatgtacctc
aagtttctgatgcagcagccgctcgtgacacacacccgacgcaccttcgatcgggccctt
cgcgctctccccattacgcaacacaacaggatatgggctctgtatcgacccttcgccaac
tcggccgaaggcgagacggcggtcaagatctggcgcaggtacatgcaggttcacccagag
gatgccgaggacttcatcgagttattggtagcagtggggctatatacggaagccgtgcac
aagtacattgaaattctcaacaacccgcggtttacgagcaagaacagcaagggacactac
gaactgtggagcgaaatggtagatttgttggtcgagcatgcgacggcggtggagacgggg
catgagacgggaatcgacgttgaacggatcatccgcagtggcattgagcggtttgccgac
cagaggggcaagctgtggtgcggcttggcgacctattggatccgacgaggcagctttgaa
cgcgcacgagacgttttcgaggagggtatcacaaccgtcatgaccgttcgcgacttcacc
ctcgtcttcgattcgtacacggagtttgaggagtccatcattagcgctctgatggagatg
gcatcgacccgggctgagaagggagaggtagacgaggtggctgatttcgatttggatatc
cgaatgatgcggttcgagcatctgatggaccgccggcccttcctcttgaatgatgtctta
ctcaggcagaacccgaacaatgtcacggaatgggagaagcgtgtagctctatggggcgac
aacaaggaggaagttgtcaagacgtaccttgatgctatcgaagccatccaaccaaagaag
gcagtgggtgcgcttcaccagctatggaccaattacgccaaattctacgaggccggagga
gacctttcaagtgcccgaagaatcatggagaaggccgtcaaggttccttacaagtccgtg
gcagagttggcagacatgtggatcgagtgggcagagatggagcttcgaaacaagtgcttc
gacgaggccatgaaagtcatggcaaaggcagtacaggcgcccaaaaggtccacggtggac
tatttcgacgaaaccctatcaccacaacaaagagttcataagagctggaagctgtggagt
ttctacgtcgacctcgtggaaagtgtcagctcgctggacgagacccgcaaggtgtacgag
aggatattcgagcttcgcatcgccactccccaaacagtagtcaactacgccaacctgctg
gaggagcacaagtactttgaagagtcgttcaagatctacgagcgcggtctcgatctcttc
agctaccccgtggccttcgaactctggaacctgtacctcaccaaagccgtcgaccgcaag
atcagtatcgagcgcctccgcgatctctttgagcaagccgtcgaggattgcccacccaaa
ttcgccaaggtcatctatctcatgtacggcaacctcgaggaggagcgcggcctcgcgcgc
cacgccatgcgcatctacgagcgggccacgcgcgccgtcgccgacgaggaccgggccgac
atgttcaacttctacatcaccaagtcggcgtccaacttcggcctgccctcgacgcggccc
atctacgagcgcgccattgcggccttacccgacgccgaggcccgcgacatgtgcctcaag
ttcgccgacatggagaagcggctgggcgagatcgatcgcgcccgtgccatctacggtcac
gcctcgcagttctgcgacccgcgcaccaaccctggcttctggaccaagtgggatcagttc
gaggtgcaacatggcaacgaggacacctacaaggagatgctccgcatcaagagaagcgtg
caggcgcagtacaacacggatgtcaacttcattgcttcgcaggcgctggcgaggagtcag
cagaagaggatggaggaggaggcagcaggaaatggaggaggagagatggacgccgaggtt
gcggatgcgatggcgcagctggagagacaggcgcgcgcgcccgtgggctttgtggcggct
tcggaaggaccgaagggcggtagcatgccggttcagcctgttgaggttcataacccggat
gctatcgatcttgatgaaatggatgaatga
DBGET
integrated database retrieval system
