KEGG   Neurospora tetrasperma: NEUTE1DRAFT45645
Entry
NEUTE1DRAFT45645  CDS       T03451                                 
Symbol
NEUTE1DRAFT_45645
Name
(RefSeq) hypothetical protein
  KO
K12620  U6 snRNA-associated Sm-like protein LSm1
Organism
nte  Neurospora tetrasperma
Pathway
nte03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:nte00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    NEUTE1DRAFT45645 (NEUTE1DRAFT_45645)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:nte03019]
    NEUTE1DRAFT45645 (NEUTE1DRAFT_45645)
Messenger RNA biogenesis [BR:nte03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     NEUTE1DRAFT45645 (NEUTE1DRAFT_45645)
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     NEUTE1DRAFT45645 (NEUTE1DRAFT_45645)
SSDB
Motif
Pfam: LSM Hfq
Other DBs
NCBI-GeneID: 20828002
NCBI-ProteinID: XP_009851650
JGI: Neute_matA2_45645
UniProt: F8MPX9
LinkDB
Position
Unknown
AA seq 163 aa
MPPPGLLGGGRPPQPQQLPAQMFTTAAQLLDLTDKKLMVALRDGRKLTGILRSWDQFANL
VLQQTKERIFVPPGTQSPAQTRGLYADVDRGLFVVRGENVLLMGEIDLDRDDDPPPGYDP
ADLELVQTLAKQKKAEEKAKEKRKVKKLSTIGFEGENVGEALL
NT seq 492 nt   +upstreamnt  +downstreamnt
atgcctccgccgggactcctaggaggcggccgtcctccccagccccagcagttgcccgcg
caaatgttcaccacagctgcccaactcctcgacctcaccgataagaagctaatggtagca
ttgcgcgacggacgaaagctcacgggcatcctccgcagttgggatcagtttgccaaccta
gtactacaacaaacaaaggagaggatattcgtgcctccaggcacgcagtcacccgcccag
accagggggctctacgccgacgtggaccggggcctcttcgttgttcgcggcgagaacgtt
ctccttatgggcgagatcgaccttgaccgcgacgacgacccgcccccgggctacgaccct
gccgacctcgaactggtgcagacactagccaagcagaaaaaggccgaggagaaggccaag
gagaagcgcaaggtcaagaagctttccaccattggcttcgaaggggagaacgtaggcgag
gcgcttctgtga

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