Neurospora tetrasperma: NEUTE1DRAFT46597
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Entry
NEUTE1DRAFT46597 CDS
T03451
Symbol
NEUTE1DRAFT_46597
Name
(RefSeq) hypothetical protein
KO
K12614
ATP-dependent RNA helicase DDX6/DHH1 [EC:
5.6.2.7
]
Organism
nte
Neurospora tetrasperma
Pathway
nte03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
nte00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NEUTE1DRAFT46597 (NEUTE1DRAFT_46597)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nte03019
]
NEUTE1DRAFT46597 (NEUTE1DRAFT_46597)
03036 Chromosome and associated proteins [BR:
nte03036
]
NEUTE1DRAFT46597 (NEUTE1DRAFT_46597)
Enzymes [BR:
nte01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
NEUTE1DRAFT46597 (NEUTE1DRAFT_46597)
Messenger RNA biogenesis [BR:
nte03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
NEUTE1DRAFT46597 (NEUTE1DRAFT_46597)
mRNA degradation factors
5'-3' decay
Decapping complex
NEUTE1DRAFT46597 (NEUTE1DRAFT_46597)
Chromosome and associated proteins [BR:
nte03036
]
Eukaryotic type
Gene silencing
piRNA pathway
NEUTE1DRAFT46597 (NEUTE1DRAFT_46597)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
NA-iREase2
CMS1
Motif
Other DBs
NCBI-GeneID:
20828046
NCBI-ProteinID:
XP_009852736
JGI:
Neute_matA2_46597
UniProt:
F8MTM7
LinkDB
All DBs
Position
Unknown
AA seq
507 aa
AA seq
DB search
MSDQLADQLKATSLSSGPEDWKKGLNLPARDTRQQTEDVTNTRGLDWEDFIHDRDLLMGI
FEAGFEKPSPIQEEAIPVALTGRDILARAKNGTGKTAAFVIPALNKINPKVSKIQCLILV
PTRELAMQTSQVCKTLGKHLGINVMVTTGGTGLRDDIVRLQDPVHIVVGTPGRILDLAGK
QVADLSECPMFIMDEADKLLSQEFTPVIEQLLQFHPKDRQVMLFSATFPLSVKDFSDKNM
TSPYEINLMDELTLRGITQYYAFVEEKQKVHCLNTLFSKLQINQSIIFCNSTNRVELLAK
KITELGYSCFYSHAKMAQQARNRVFHDFRNGVCRNLVCSDLLTRGIDIQAVNVVINFDFP
KNAETYLHRIGRSGRYGHLGLAINLINWDDRFNLYNIERDLGTEIQPIPQTIDKSLYVYE
NPESIPRPISTFKPIAQQPQQQLQQSQRPQQPTNYQNNRGQPGSSGPRGGRGRGFQGQGG
RQNQNYGGQRGPRTQGQGQPQGPLSAQ
NT seq
1524 nt
NT seq
+upstream
nt +downstream
nt
atgtccgaccaactagcggatcagttgaaagctactagtctgagctcaggcccggaagac
tggaaaaagggtcttaacctacctgccagggacacaagacaacagaccgaggatgttaca
aacacgaggggtctggattgggaagacttcatacacgacagggatctcttgatgggcatt
ttcgaggctggcttcgagaaaccgtccccaattcaggaggaagcgatccccgttgccctc
accggccgagacatcctcgcacgcgcaaagaacggcaccggcaagaccgccgctttcgtc
attcccgccctcaacaagatcaaccccaaggtctccaagatccaatgtcttattctcgtt
cccacccgtgagcttgccatgcagacatcccaagtctgcaagacgctcggcaagcatctc
ggcatcaacgtcatggtgacaaccggcggaactggcctgcgggacgacattgtgcgtctg
caggacccagtccacatcgttgtcggaacaccaggtcgtatcctcgatttagctggcaag
caggtggccgatctcagcgagtgcccaatgttcatcatggacgaggctgataagctcctg
tcacaagagtttacccccgtcattgagcagcttctgcagttccaccccaaggatcgtcag
gtcatgctgttctccgccactttccctctttcggtcaaggatttctcggacaagaacatg
accagcccgtacgagatcaacctcatggacgagcttaccctccgcggtatcacccaatac
tatgcctttgttgaggagaagcaaaaggttcactgcctgaacactctgttttccaagctt
cagatcaaccagtccatcattttctgcaactctaccaaccgcgtcgaactgcttgccaaa
aagatcactgagcttggatactcgtgcttctatagtcatgccaaaatggctcagcaggcg
agaaaccgtgtcttccacgacttccgcaacggtgtttgccgtaacctggtctgctcggat
ctcctcacccgtggtattgacattcaggcagtgaacgtcgtcatcaacttcgatttcccc
aagaacgccgagacgtacctccaccgtattggtcgttctggtcgttatggtcaccttggt
cttgctattaacttgatcaattgggatgacagattcaacctttacaacattgagcgcgat
cttggtactgagatccagcccattcctcagaccattgacaagagcctctacgtgtacgag
aaccccgaatcgattccccggcccatctcgaccttcaagcctattgcccagcagccgcaa
cagcaactgcagcagtcgcaacggcctcaacagcccaccaactaccagaacaaccgcggg
cagcccggtagcagtgggccccgtggaggtcgtggacgtggtttccagggccagggaggc
cgtcagaaccagaattacggtggtcagcgcggtcctcgtacccaaggtcagggccagcct
cagggtccactgtctgcccagtag
DBGET
integrated database retrieval system
