Neurospora tetrasperma: NEUTE1DRAFT58240
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Entry
NEUTE1DRAFT58240 CDS
T03451
Symbol
NEUTE1DRAFT_58240
Name
(RefSeq) hypothetical protein
KO
K03008
DNA-directed RNA polymerase II subunit RPB11
Organism
nte
Neurospora tetrasperma
Pathway
nte03020
RNA polymerase
nte03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
nte00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
NEUTE1DRAFT58240 (NEUTE1DRAFT_58240)
09124 Replication and repair
03420 Nucleotide excision repair
NEUTE1DRAFT58240 (NEUTE1DRAFT_58240)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nte03021
]
NEUTE1DRAFT58240 (NEUTE1DRAFT_58240)
03400 DNA repair and recombination proteins [BR:
nte03400
]
NEUTE1DRAFT58240 (NEUTE1DRAFT_58240)
Transcription machinery [BR:
nte03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
NEUTE1DRAFT58240 (NEUTE1DRAFT_58240)
DNA repair and recombination proteins [BR:
nte03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
NEUTE1DRAFT58240 (NEUTE1DRAFT_58240)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_L_2
RNA_pol_L
DUF4906
Motif
Other DBs
NCBI-GeneID:
20828661
NCBI-ProteinID:
XP_009847348
JGI:
Neute_matA2_58240
UniProt:
F8MBN2
LinkDB
All DBs
Position
Unknown
AA seq
141 aa
AA seq
DB search
MNGANPKQNSEPNRFELFLLQDGEKKIEEKVFTGMSNTSDFKILKEDHTLGNLLAEHLKQ
APHVLMAGYKIAHPNVPELFIRIQTDGSITPREALVGACKQLVAMYGQLGREFQKELALR
QYADQGEQGGGVNGGANGGHY
NT seq
426 nt
NT seq
+upstream
nt +downstream
nt
atgaacggagcaaatcccaagcaaaacagcgagccgaaccggttcgagctcttccttctc
caggatggagagaagaagattgaggagaaggttttcactggcatgtcgaacacctccgac
ttcaagattctcaaggaggaccacactctcggcaacctcctcgccgaacatctgaagcag
gcccctcatgtcttgatggcaggatacaagattgcccaccctaacgtgccggaactcttc
atccgtatccagacagacggaagcatcaccccgcgcgaggccctcgttggcgcgtgcaag
cagctcgtggccatgtacggccagctgggccgcgagttccagaaggagcttgccctgcgc
cagtatgctgaccagggcgagcagggaggcggcgtgaacggtggtgctaatggcggtcat
tactga
DBGET
integrated database retrieval system
