Neurospora tetrasperma: NEUTE1DRAFT61458
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Entry
NEUTE1DRAFT61458 CDS
T03451
Symbol
NEUTE1DRAFT_61458
Name
(RefSeq) hypothetical protein
KO
K12879
THO complex subunit 2
Organism
nte
Neurospora tetrasperma
Pathway
nte03013
Nucleocytoplasmic transport
nte03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
nte00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
NEUTE1DRAFT61458 (NEUTE1DRAFT_61458)
09122 Translation
03013 Nucleocytoplasmic transport
NEUTE1DRAFT61458 (NEUTE1DRAFT_61458)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nte03019
]
NEUTE1DRAFT61458 (NEUTE1DRAFT_61458)
03041 Spliceosome [BR:
nte03041
]
NEUTE1DRAFT61458 (NEUTE1DRAFT_61458)
Messenger RNA biogenesis [BR:
nte03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
NEUTE1DRAFT61458 (NEUTE1DRAFT_61458)
Spliceosome [BR:
nte03041
]
Complex C
Other components
EJC/TREX
NEUTE1DRAFT61458 (NEUTE1DRAFT_61458)
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
NEUTE1DRAFT61458 (NEUTE1DRAFT_61458)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
THOC2_N
Tho2
Thoc2
Motif
Other DBs
NCBI-GeneID:
20828879
NCBI-ProteinID:
XP_009849959
JGI:
Neute_matA2_61458
UniProt:
F8MIA0
LinkDB
All DBs
Position
Unknown
AA seq
2531 aa
AA seq
DB search
MPPKRKRSDHRGLPDSGPSRPPPHRPSDTSLGQHDRGYDGGRGGRNGRNARRPDRRDSNQ
PYNNPNPPIPSSASRPPSSSSANNLPPINTAPPTPAPNPIAPAPAPAPAPPPQPTYSAPP
SPIQPGYDYSIITDDRVSKWSKGARQEVIDHGVQSRDDEDLTEVAAIFQELIHSAVDGRL
PGSDAGKVIKDILGPEPSEADRAALAFDAHTLFLDTVATFMDVENAPFRPQLRDLMYATE
VSTTLMRQILDPAVLQPLGLVRDTFVRVGIRQSTNLLYRQANYNLLREETEGYSKLVTEL
FTTSSAEPPSSEVVQAAFNKVMGLIGTFDLHPGRVLDVTLDVFASVLIKQFRFFIKFLRV
SSWWPRTQIKLPPDTFVGGLPIWALPDHSNWVASEEEEKAIAAQRLKRDVAFWDRARKIK
LDAFFELGGRQVTNLEDEELPDASRKSGQENSIEKDWIKITKTLPPTGNRDAAQMLGFKL
RFYTTEARDSEDMLPANLLYLVALLIKVGFITLTDLWEHIWPPDDMMEAVKEARFKELEE
KERANRPGEKPKLPEPDDQKVILLKCLLTIGAIPESLFIIGRHDWILQAHPDLIPLVHRI
LHHSVETVYQQSRPQPKSSSSANCPGKKLPDPDQSGVPKGSIRLAAVTPKRALRWPFPDA
ETSEGGGYRFYWDEWADNVPVCQTVDDIFTLCDTLVNVIGVSIGQDAGLIAKLTSIGAKS
MADDQSPANRSRWLLLLKRLLVPSLSLLETNSSVVDGVWTLLKQFPIHVRYNVYAEWYEG
QTSRLEPMKKAFARTRLETLSTMKRLSLTNIPQMAKTLAKTAYPSPGIVCKVALQQIESY
SNLIEAFVECAKYFTDLGYDVLVWSVLSSLGGQQRSRTQESSVLLTSKWLQALSRFSGKV
FLRYSTMDPTPILRYVDNQLSKGNSTDLVILKELISSMGGVVSDLDFTDAQLHAMTGGEL
LRRETLTNLGDKRYTSTKSADRLIQALMTNGLAGRLLANIAQYRQSAISAVVQGDAHIKY
LATMADDTHQVLLQYLDLLRSSLDGDTFNNLVPSVIRLMRDYGLGAGLAFLIGRASIRTA
MNRVRGQSESQAPVASAAPDTDGDVTMTTANGDDTVNTLAADGQTTASAQGANERKVDPV
LEPFQPVIDEIPTVLSEDTLRYLTPTCYVLFWALQLGDLSFPQDNYSDEINRLKKLAREV
MNDRSDMTRAGMNKKTQKQAEINARVSSLLKENSEELQRYSKFRFQLSRQLTTWFPADIT
KVDVTADTMLEECILPRLQLSALDAEYSFKFLKFLHEFSAPNFKLMSLYDRLFNHNRLRS
MLFTCTVREAEHIGRFLKCILSELSKWHGDKNAYEKEALGSKEVQGKKTRNYVGFATAFD
ADGKPTAFVEHDAFRDLLFKWHKELNSALRACLNDMEWMHIRNAITVLKAVIDFFPAINF
MAEKFLEQLKTITEREAASKNAPETEEGHRVDLSVTAQTAFSELQKRKSKWILVQAFRPG
TVSASAQAPTRTNADRAQTSDSKEEGKSSLRAATVALKPSSHGRKQTAAEVEDGEVKDNR
SGSARSSAGSGNQKDSTPTRNLPTREAQKDANPPQRSMGGNGPPPRPPAPNAGPLPSKLP
GNRNDVNRPSTLNPGGRGLPSNPDLPRRPDVPIPEVFSASQFNRGQHNMNNRREPPSSRD
SRDAREPRETREPRETHPRETREPVHGRDSRDYRAPETSRPERPRDFPSTDRRPAEPPTR
DSSRQIDRDWPNRAELPPRWTEPAAAPGRDGRQPRDRTPHGANRHDGRLSRENAGAAPSP
AAPSHNDAPEPPINPERARLLAEAEQKQSLPTPPRAAEQQHSHINPARAALITDIREPQG
RSSSRDQTRERPPRTESPRASERSANSQADNARDDRQGRHRHADYHSSSRDGHAHGDSGS
LHGRLDRPAEMERPGGSRDGSYNQPPPRGMDHDHGRPVQQDPNYGRLNPIQSVVDSGPAP
VLAATSGSGGPPPSGPRGRGRNNARMGPANGVPIRPDGRFPGMEANRTSSPDRQPPTGPS
SSRQSRRGQYDNAGGNVNATPSSLPAQSPGVHPDRMSHINQQPQQSGQSSQQQQPQAGPP
PPPPQPPSAPGVHPDRLNQINGPPSHRPTGPSAHNRPPINTPDRPSMSAPNNSGRQQPSG
QHGSNFVTPTGPSASNNDRMRSGGGSRQLRGIQNMLDKASMDARGPGSRMRGSSRINTMV
DSDAQVLAGASPGNTPVNDRPDPLRDIRESGSRREMSTDRGDRERDRGRDTRDREPRDRE
PRSGLAPIQVVGDSREDSSSIPHGGHSRGDVNGEGYGSSSRGGAGGDHERGSSRHHSSRS
ERSDRPSRRSSRERNPGGGGGGGGGDGKESSSRSDYSRESRSRGGGGGGGPSTANAPGGP
SADLMTGGSSRDRRSGRDSNAGSGSGHRGGGGDMPPPPPSREPSHRGHGSHRGGGDGSGH
SQGGAPPMGGGRSDGHGRPPRESRSSRPSGPGGGHDDMRGGGDDRSRKRRGDGVIDSSQG
LGGHQDKRPRR
NT seq
7596 nt
NT seq
+upstream
nt +downstream
nt
atgcctcccaagcgcaaaagatccgatcaccgaggcctgcccgactctggcccctccaga
cctccccctcaccgaccctccgatacgtcgctaggacagcatgaccgaggctatgatgga
ggacgcggtggccgtaatgggagaaacgcccggagacccgatcgtcgcgactcgaatcag
ccctacaacaatcccaacccccccataccctcgtccgcttcccgccctccgagctcttcc
tcggccaacaacctaccgccgataaacactgcaccgccaacaccagccccaaacccgatc
gcgccggcgccggcgcctgcaccagctccgccacctcagccaacatactcggcacctcct
tcacccattcagcccggttacgattatagcatcatcaccgatgatcgcgtctccaagtgg
tccaaaggcgcgcgtcaagaagtcatcgaccatggtgtccagtcacgcgacgacgaggac
cttaccgaggttgccgccatattccaggaactcatccactctgctgtcgacggtcgtctt
cccggttccgatgctggcaaggtgatcaaggatatactgggtcccgagccttcggaggct
gatcgtgccgccctggctttcgatgcccataccctgtttctcgacaccgtagccaccttt
atggacgtggaaaatgcgcctttccggccccagctccgtgatctcatgtacgccacagag
gtgtcgaccaccctaatgcggcaaatccttgaccctgcagttctccagccactgggcctc
gtccgcgatacgttcgtgcgtgtgggcatccggcaatcgacgaacttgctctatcgccag
gcgaattacaatcttctgcgagaagagacagagggctactctaaacttgttaccgaactg
tttacgactagcagtgcggaaccgccatcttctgaggtcgtgcaggctgccttcaacaag
gttatgggccttattggaacatttgacctgcacccaggccgcgttctcgatgtcacgctg
gacgtgtttgcctcagtacttattaaacagttcaggttctttatcaaattcctgcgcgtg
agttcctggtggcctcgtacccaaatcaaactcccacccgacacatttgttggcggttta
cctatatgggcccttcccgaccactccaactgggttgcgagcgaggaggaagaaaaggct
attgctgcccagcgtttaaaacgcgatgttgccttctgggacagagcacgcaagattaaa
cttgatgcatttttcgagctcggcggtaggcaggtcaccaacttggaagacgaggagctt
ccggatgccagcaggaagagcggacaggagaacagtattgaaaaggattggatcaaaatc
accaaaaccctaccacctaccggcaaccgtgatgcagcccagatgctgggcttcaagttg
cgtttctatacaactgaagctagggatagtgaagacatgctccctgcaaaccttctctat
cttgtagccctcctcatcaaggttgggttcatcaccctgacagatctttgggagcacatt
tggccgccggacgacatgatggaggctgtcaaagaagccaggttcaaggagctggaagag
aaggagagggcaaaccgaccaggagagaagcccaagcttccagagcctgatgaccaaaag
gttattcttctcaagtgtcttctcacgattggtgctatcccggaatctttgttcatcata
ggacgacatgactggattcttcaagcgcatcccgaccttattcctcttgtacaccgtatc
cttcaccactctgtcgaaaccgtctatcaacaaagccgccctcaaccgaaatcttcgtct
tcggccaattgccctggcaagaaacttccagacccggaccaatctggggttcccaaggga
agtattaggctcgccgccgtcactcctaagcgcgccttgagatggccgttcccggacgct
gagaccagtgaaggaggtggataccgcttttactgggacgagtgggcggataatgttcct
gtctgtcaaactgtcgacgacatcttcacgctctgcgataccttggtaaacgtaattggc
gtgagcatcggccaggatgctggtctgattgcgaagctcacaagcatcggcgccaagagc
atggctgacgatcagtcaccggccaaccgttcccgctggctgttgctactcaaacgcctg
cttgtgccttccttgagtttgctggaaaccaactcctcggttgttgatggtgtctggacc
cttctcaaacagttcccaattcatgtgcgatacaacgtctatgccgaatggtacgagggt
cagacatcccgactcgaacccatgaagaaggcgttcgcacgaacccgactagagacgctc
agtaccatgaagcgtttgtctttaacgaatatcccacagatggccaagacccttgccaaa
accgcttatccatcacccggcatcgtttgcaaggtcgcgctgcagcaaatcgagtcctat
agcaacctgattgaggccttcgtggagtgcgccaagtatttcacagaccttggttacgat
gtcctcgtttggtctgttcttagctctcttggtggacagcagagaagccggacacaagaa
agctcggtgctgcttaccagcaaatggctccaggccctgtccagattctccggcaaggtc
ttcctccgctactctactatggatcccacacctatccttcgttatgtggacaaccagctt
tccaagggtaactccactgacctcgtcatcctcaaggagttgatctcttccatgggaggt
gtggtttcagacttggatttcaccgatgcacagcttcatgccatgactggtggtgagctt
ctaagacgcgaaactctaaccaacttgggcgataagcgttatacttcaaccaagagtgcc
gaccgactcattcaggcgctcatgacgaacggacttgctggccgcctcctcgccaacatt
gctcagtaccgccaaagcgccatttctgcggtcgttcaaggcgatgctcatatcaagtac
ctagccaccatggcagacgatactcaccaggtgctactgcagtatctggaccttctccgc
agtagtcttgatggagataccttcaacaaccttgttcccagtgtcattcgactcatgcgc
gactacggtcttggggcaggtctcgcgttcttgatcggacgggccagtattcgcacggct
atgaatcgagtccgaggccagtcggagagtcaggcgccggttgcctcagctgcccctgac
acggacggagatgtgaccatgactacagcaaatggcgatgatactgtgaatacgcttgcc
gccgacggccaaactacagcctcggctcaaggcgcaaatgaacggaaagtggatcccgtt
ttggagcctttccaacctgtcattgacgagattcccactgtcctgtcagaggatactctc
cgatacctcactcccacctgctacgtcctcttctgggctttgcagttgggcgacctttct
ttcccgcaggataactacagtgacgaaattaacaggctcaagaagcttgctagggaggta
atgaatgacagatcggacatgacacgagctggaatgaacaagaagacgcagaaacaagcc
gaaatcaacgctcgagtatcatctcttctcaaggaaaatagcgaagagctccaacgatac
tcgaaattccgctttcagctgagcagacagcttactacttggttcccggctgatatcacg
aaagtcgatgtgacggcagataccatgcttgaggaatgcatccttcctcggttgcagctt
tctgctttggatgccgagtacagcttcaagttcctcaagttccttcacgagttctcagca
ccaaatttcaagctcatgtcactctacgaccgactattcaaccacaacaggctccgcagt
atgctcttcacttgcactgtacgtgaagcggagcacatcggtcggttcttgaagtgcatt
ctcagcgagctctcgaagtggcacggtgacaagaatgcttacgagaaagaagcattgggc
tcgaaggaggtgcaaggaaagaagacaaggaactacgttggtttcgctactgcttttgac
gcggatgggaaacccacggcttttgttgaacacgatgcgttccgtgacctcctcttcaag
tggcataaggagctcaactcagcactaagagcatgcctcaatgacatggagtggatgcat
atcaggaatgccattaccgttttgaaggctgtcatcgacttcttcccagcaatcaacttc
atggccgagaagttcttggagcaactcaaaaccatcactgagcgagaggctgcatccaag
aacgctcctgagaccgaggaaggccatcgagtcgatctttcggtcacagcacagacggcg
ttctctgagctacagaagaggaagtccaaatggatcttggttcaggcattccgccctggt
acagtaagtgcatcggctcaggctccgacgcgtacaaacgctgaccgagcacagacgagt
gattcgaaggaggaaggcaagtcctctcttcgcgctgcgacagtagccctcaagcccagt
tctcatgggcggaaacaaaccgccgccgaggttgaagatggtgaagtcaaggataacaga
agtggaagtgcaagatctagcgcgggctctggaaaccagaaggactcgactccgacaaga
aacctccctactagggaagcgcaaaaggacgctaatcctccacaaagatcgatgggaggt
aacgggccgcctcctcgacctccagcgcctaacgcaggcccgctaccgtccaaactccct
ggaaaccgcaatgatgtcaacagaccatcaactctaaaccctggcggccgcggcctgccc
agcaatcctgatctgccaaggagaccagatgtgccaattccagaggttttcagcgccagt
cagttcaaccgaggccagcacaacatgaacaacagaagagagcccccttcatctagggat
agccgtgatgcccgagagccgcgtgagactcgggagccgcgcgagacacatccccgtgaa
acgagggagcctgtgcatggtcgggatagcagagactatcgagccccggaaacgtcacgc
cctgaacgaccgcgcgacttcccatcaaccgacaggcgtcccgcggaaccgcctacaagg
gactcgtctcgccaaatcgatagggattggccgaatcgtgcagaactcccacctcgttgg
actgagcctgcagctgctcctggccgtgatggccggcaaccacgagacagaacgccccac
ggtgctaaccggcacgatggaagactctctagggaaaatgcaggtgcggcaccttcaccg
gctgcgccatctcacaatgacgcaccagagccgcctatcaacccggaacgtgctcgactt
ctagcagaagccgaacagaagcagtctcttcccaccccaccgagagctgccgaacagcag
cattctcacatcaacccggcgagagctgctctcatcaccgacattcgtgagccgcagggc
cgttcctcgtccagggaccaaactcgcgaacggcctcctcgtacggaatctcccagggca
tctgaacggtcggcgaacagccaagccgataacgctcgcgacgaccgtcaaggtcgccat
cgacatgcggattaccacagcagcagccgtgacggtcatgctcacggagatagcggatcg
ttacatggccgcctagaccgccccgctgaaatggagagaccaggaggatccagagatggt
tcatacaatcagcctcctcctcgtggcatggaccatgaccatggcagacctgtccaacaa
gatcctaactacggtaggctgaatcctatccagtcagtcgtcgacagcggaccggcacca
gtactggcagcgacttcggggtccggtggtccacctccatcaggcccacggggtcgtggt
aggaataacgctagaatgggtcctgctaatggagtcccaatacgtcccgacggccggttc
ccgggcatggaagccaaccgtacctcttcacccgatcgtcaacccccgactggcccttcg
tcttcccgacagtcgcgtagaggtcagtatgacaatgcaggcggcaatgtcaacgcaaca
ccttcttccctgcctgcccaatctccgggtgtccatcctgatcggatgagccacatcaac
cagcaaccacagcaaagcggtcaatcaagtcagcaacaacaaccacaagctggacctccg
ccgcctccgccccaacctccttcggctccgggcgttcatcctgatcggttgaaccaaatc
aatggtccacctagccatcgaccaactggcccaagtgcccataaccggcctccgatcaac
accccagatcggccctccatgtctgcacccaacaacagcggacggcaacaaccgtctgga
cagcatggctcgaacttcgtcactcctaccggcccatcagcttctaacaatgaccgcatg
cgatctggcggaggaagcagacagcttcgtggtatccagaacatgcttgacaaagcatcc
atggacgctcgtgggcctggttcgcgcatgcgcgggtcgtcaagaatcaacaccatggtg
gactcggatgcccaagtactagctggtgcatcacctggcaacacacctgtcaatgacagg
cccgaccccctcagagacattcgggagagcggttcgcgcagggaaatgagcacggatcgc
ggcgatcgggaacgggaccgtggcagagacaccagagatcgggaacctagagatcgggag
ccacgtagtggtctggcgcccatccaagttgtcggcgacagtcgtgaggattcctcgtcg
atcccacacggcggtcattcccgtggtgacgtgaacggagaagggtacggctccagcagc
agaggaggagccggcggcgaccacgagcgcggaagtagccggcaccatagctctcgttcg
gagagaagcgacagaccttcgagaagaagcagccgtgagcgcaaccctggtggtggtggt
ggtggtggtggtggtgacggcaaggaatcgagctctagaagcgactattccagggaaagc
aggagccgcggcggcggcggtggcggcggcccatcgacggccaacgcacctggtggcccc
agtgccgaccttatgacgggcgggtcgtcgcgtgaccggagatccggccgcgattcaaat
gcaggcagcggatctggtcacagaggcggtggaggagacatgccgccgccaccaccctca
agagaacccagtcaccgcggccatggcagccacagaggtggaggcgatggatcaggtcat
agccagggtggagcgccgcctatgggaggtggaaggagtgatggccatggtaggccacct
cgagaatcaagatcatccaggcctagcggacctggtggtggtcatgatgacatgagagga
ggcggtgatgacaggtcaaggaaacggagaggtgatggagtaatcgattcgtctcagggg
cttggaggccatcaggacaagcggccgcgtcgctag
DBGET
integrated database retrieval system
