KEGG   Neurospora tetrasperma: NEUTE1DRAFT62880
Entry
NEUTE1DRAFT62880  CDS       T03451                                 
Symbol
NEUTE1DRAFT_62880
Name
(RefSeq) hypothetical protein
  KO
K15542  polyadenylation factor subunit 2
Organism
nte  Neurospora tetrasperma
Pathway
nte03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:nte00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    NEUTE1DRAFT62880 (NEUTE1DRAFT_62880)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:nte03019]
    NEUTE1DRAFT62880 (NEUTE1DRAFT_62880)
Messenger RNA biogenesis [BR:nte03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage and polyadenylation specificity factor (CPSF) complex
     NEUTE1DRAFT62880 (NEUTE1DRAFT_62880)
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_EML_2 WDR55 EIF3I Beta-prop_TEP1_2nd Beta-prop_CAF1B_HIR1 Beta-prop_EML WD40_MABP1-WDR62_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_IFT140_1st Beta-prop_TEP1_C Beta-prop_EIPR1 WDR90_beta-prop_4th Beta-prop_SCAP WD40_RFWD3 Beta-prop_WDR19_1st Beta-prop_RIG_2nd Beta-prop_DCAF4 Beta-prop_IFT122_1st Beta-prop_WDR75_1st WD40_MABP1-WDR62_1st Beta-prop_WDR75_2nd PEP5_VPS11_N MIOS_WD40 Beta-prop_WDR11_2nd Beta-prop_Vps41 Nucleoporin_N
Other DBs
NCBI-GeneID: 20828972
NCBI-ProteinID: XP_009850823
JGI: Neute_matA2_62880
UniProt: F8MM52
LinkDB
Position
Unknown
AA seq 660 aa
MSYEPRGDHDKGYGGGGGHDGLPPRNRGRRPVTDYGASVVHYMRHRQPRYRGSYAGEVER
PSPSYIVDMLPPYARVTNPADSVPSRHLHSSLNKIKHPINVVRWTPEGRRLLTASSSGEF
TLWNGTGFNFETIMQAHDSAIRALVYSHSDDWLVSADHDGIIKYWQPNFNNVESIRGHTD
PIRDLAFSPNDTKFVTASDDQTLKVFDFAGGSTDMTLTGHGWDAKSCDWHPSRGLIVSGS
KDHLVKLWDPRTGRCLTTLHGHKNTITKTLFERVQGNCLATSARDQTARVFDLRMMRDIA
LLRGHEKDISTLTWHPVHSNLLSTGGSDGSLFHYLLDEPNTAPDGSVMPIPAVYDTADPS
SAPAQPIYPAHKIPYAHDFAIWSLDWHPLGHILASGSNDRITRFWSRARPGEAPESFNDR
YHIGEAAAEAQGTWDRRGGRHMRQVEEEQELEDEMDGLVDQKMPIKGQPGVGGGGMMPGL
SFPSIPGLPLQQVPSSGPGGSGFIPPPPIIPGVGGATGVPPPLPFPIHGMPGLPAGVVPP
PLPGLDLKNPPDFSALAEMMKKAGYQPPPPPGSAGAPMPPPGILPPGLIPPPGAAGFPMP
PPGFAPPPLIPGAGGPPGGATHPDGGNDQYDSSGRRRAPLPSQEESLRMEQSKGNYTRVR
NT seq 1983 nt   +upstreamnt  +downstreamnt
atgtcatacgagcccaggggagatcatgacaagggctatggagggggaggaggtcatgat
ggcctcccaccccgaaatagaggcagacgtcccgtcaccgactatggtgcttcagtagtt
cactacatgcgccacaggcaaccgagataccggggatcatacgctggtgaagttgaaagg
cccagcccgagttatattgttgatatgctaccaccatacgcccgagtcaccaatccagca
gactccgtaccatcaaggcatcttcactcttccctcaacaaaatcaagcaccccatcaat
gtggtacgatggacgccagaaggacgaaggttgttaacggccagcagcagtggagagttt
acgctctggaacggcacaggattcaacttcgaaacgatcatgcaggcccacgattccgcc
attcgtgctctagtatattcgcacagcgacgactggctcgtctctgccgatcatgacggt
atcatcaaatattggcagccaaacttcaacaatgtcgagagcattaggggccatactgat
cccatccgcgaccttgccttcagccccaacgacaccaaatttgtcacggcttcagatgat
caaacactcaaagtctttgactttgctggcggctcaacggacatgactctgacagggcat
ggatgggacgcaaagagttgcgattggcatcccagcagaggcctgattgtctctggttcg
aaagatcatctggtcaagctgtgggatccaaggacgggtagatgcctgaccacgcttcat
gggcacaaaaacaccatcaccaaaaccctcttcgagagagtgcaaggaaactgtttggca
acatcagctagagatcagacagctcgcgtgttcgaccttcgaatgatgcgagacatcgcc
ctcctcaggggccatgaaaaggacatatcgacattgacgtggcacccagtccactccaac
ctcctaagcaccggcggctcggacggctcgctattccactacctcctggacgagccgaac
accgcgcccgacggctcagtcatgccgattccggcagtttacgacaccgccgatccttcg
tccgcacctgcccaacccatctacccagcccacaagatcccctatgcccacgacttcgcc
atctggtcgctcgactggcacccgctcggccacatcctcgcctcgggatccaacgatcgc
atcacacgtttctggtctcgcgcaagacctggcgaggctcccgagtccttcaacgaccgg
tatcacatcggcgaggcagcagccgaagctcaaggcacctgggaccgccgcggcggccgt
cacatgcggcaagtcgaggaggagcaggagctggaggacgagatggacggcctggtggat
caaaagatgcccatcaaggggcagcccggcgttggcggcggcggaatgatgcctggtctt
tccttccccagcattcccggccttcctctccagcaggttcccagctctggccctggcggc
agcggtttcataccgccaccacccatcatccccggcgttggtggtgccaccggtgtcccg
cctcctctccccttccctatccacggcatgcccggtctgcccgccggtgtcgtcccgccg
ccccttccgggcttagatctgaagaacccgcccgactttagcgcgctcgccgaaatgatg
aagaaggccggttatcaaccgccgccgccgccaggctcggctggcgcaccgatgccccct
cccggcatcctgccccctggcctaatccccccgccgggcgcggcgggcttccctatgccc
cctcctggatttgcgcctccgccgctgattcctggtgctggtgggccgccgggaggagcg
actcacccagatggtgggaatgatcaatatgattcatcagggaggagacgcgcgccgttg
cctagtcaggaggagagtcttaggatggagcagagcaagggcaattatacgcgcgtgaga
tag

DBGET integrated database retrieval system