Neurospora tetrasperma: NEUTE1DRAFT62880
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Entry
NEUTE1DRAFT62880 CDS
T03451
Symbol
NEUTE1DRAFT_62880
Name
(RefSeq) hypothetical protein
KO
K15542
polyadenylation factor subunit 2
Organism
nte
Neurospora tetrasperma
Pathway
nte03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
nte00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
NEUTE1DRAFT62880 (NEUTE1DRAFT_62880)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nte03019
]
NEUTE1DRAFT62880 (NEUTE1DRAFT_62880)
Messenger RNA biogenesis [BR:
nte03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
NEUTE1DRAFT62880 (NEUTE1DRAFT_62880)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
WDR55
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_EML
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_IFT140_1st
Beta-prop_TEP1_C
Beta-prop_EIPR1
WDR90_beta-prop_4th
Beta-prop_SCAP
WD40_RFWD3
Beta-prop_WDR19_1st
Beta-prop_RIG_2nd
Beta-prop_DCAF4
Beta-prop_IFT122_1st
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_1st
Beta-prop_WDR75_2nd
PEP5_VPS11_N
MIOS_WD40
Beta-prop_WDR11_2nd
Beta-prop_Vps41
Nucleoporin_N
Motif
Other DBs
NCBI-GeneID:
20828972
NCBI-ProteinID:
XP_009850823
JGI:
Neute_matA2_62880
UniProt:
F8MM52
LinkDB
All DBs
Position
Unknown
AA seq
660 aa
AA seq
DB search
MSYEPRGDHDKGYGGGGGHDGLPPRNRGRRPVTDYGASVVHYMRHRQPRYRGSYAGEVER
PSPSYIVDMLPPYARVTNPADSVPSRHLHSSLNKIKHPINVVRWTPEGRRLLTASSSGEF
TLWNGTGFNFETIMQAHDSAIRALVYSHSDDWLVSADHDGIIKYWQPNFNNVESIRGHTD
PIRDLAFSPNDTKFVTASDDQTLKVFDFAGGSTDMTLTGHGWDAKSCDWHPSRGLIVSGS
KDHLVKLWDPRTGRCLTTLHGHKNTITKTLFERVQGNCLATSARDQTARVFDLRMMRDIA
LLRGHEKDISTLTWHPVHSNLLSTGGSDGSLFHYLLDEPNTAPDGSVMPIPAVYDTADPS
SAPAQPIYPAHKIPYAHDFAIWSLDWHPLGHILASGSNDRITRFWSRARPGEAPESFNDR
YHIGEAAAEAQGTWDRRGGRHMRQVEEEQELEDEMDGLVDQKMPIKGQPGVGGGGMMPGL
SFPSIPGLPLQQVPSSGPGGSGFIPPPPIIPGVGGATGVPPPLPFPIHGMPGLPAGVVPP
PLPGLDLKNPPDFSALAEMMKKAGYQPPPPPGSAGAPMPPPGILPPGLIPPPGAAGFPMP
PPGFAPPPLIPGAGGPPGGATHPDGGNDQYDSSGRRRAPLPSQEESLRMEQSKGNYTRVR
NT seq
1983 nt
NT seq
+upstream
nt +downstream
nt
atgtcatacgagcccaggggagatcatgacaagggctatggagggggaggaggtcatgat
ggcctcccaccccgaaatagaggcagacgtcccgtcaccgactatggtgcttcagtagtt
cactacatgcgccacaggcaaccgagataccggggatcatacgctggtgaagttgaaagg
cccagcccgagttatattgttgatatgctaccaccatacgcccgagtcaccaatccagca
gactccgtaccatcaaggcatcttcactcttccctcaacaaaatcaagcaccccatcaat
gtggtacgatggacgccagaaggacgaaggttgttaacggccagcagcagtggagagttt
acgctctggaacggcacaggattcaacttcgaaacgatcatgcaggcccacgattccgcc
attcgtgctctagtatattcgcacagcgacgactggctcgtctctgccgatcatgacggt
atcatcaaatattggcagccaaacttcaacaatgtcgagagcattaggggccatactgat
cccatccgcgaccttgccttcagccccaacgacaccaaatttgtcacggcttcagatgat
caaacactcaaagtctttgactttgctggcggctcaacggacatgactctgacagggcat
ggatgggacgcaaagagttgcgattggcatcccagcagaggcctgattgtctctggttcg
aaagatcatctggtcaagctgtgggatccaaggacgggtagatgcctgaccacgcttcat
gggcacaaaaacaccatcaccaaaaccctcttcgagagagtgcaaggaaactgtttggca
acatcagctagagatcagacagctcgcgtgttcgaccttcgaatgatgcgagacatcgcc
ctcctcaggggccatgaaaaggacatatcgacattgacgtggcacccagtccactccaac
ctcctaagcaccggcggctcggacggctcgctattccactacctcctggacgagccgaac
accgcgcccgacggctcagtcatgccgattccggcagtttacgacaccgccgatccttcg
tccgcacctgcccaacccatctacccagcccacaagatcccctatgcccacgacttcgcc
atctggtcgctcgactggcacccgctcggccacatcctcgcctcgggatccaacgatcgc
atcacacgtttctggtctcgcgcaagacctggcgaggctcccgagtccttcaacgaccgg
tatcacatcggcgaggcagcagccgaagctcaaggcacctgggaccgccgcggcggccgt
cacatgcggcaagtcgaggaggagcaggagctggaggacgagatggacggcctggtggat
caaaagatgcccatcaaggggcagcccggcgttggcggcggcggaatgatgcctggtctt
tccttccccagcattcccggccttcctctccagcaggttcccagctctggccctggcggc
agcggtttcataccgccaccacccatcatccccggcgttggtggtgccaccggtgtcccg
cctcctctccccttccctatccacggcatgcccggtctgcccgccggtgtcgtcccgccg
ccccttccgggcttagatctgaagaacccgcccgactttagcgcgctcgccgaaatgatg
aagaaggccggttatcaaccgccgccgccgccaggctcggctggcgcaccgatgccccct
cccggcatcctgccccctggcctaatccccccgccgggcgcggcgggcttccctatgccc
cctcctggatttgcgcctccgccgctgattcctggtgctggtgggccgccgggaggagcg
actcacccagatggtgggaatgatcaatatgattcatcagggaggagacgcgcgccgttg
cctagtcaggaggagagtcttaggatggagcagagcaagggcaattatacgcgcgtgaga
tag
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integrated database retrieval system