Neurospora tetrasperma: NEUTE1DRAFT64944
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Entry
NEUTE1DRAFT64944 CDS
T03451
Symbol
NEUTE1DRAFT_64944
Name
(RefSeq) pre-mRNA splicing factor ATP-dependent RNA helicase PRP43
KO
K12820
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:
5.6.2.6
]
Organism
nte
Neurospora tetrasperma
Pathway
nte03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
nte00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
NEUTE1DRAFT64944 (NEUTE1DRAFT_64944)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
nte03041
]
NEUTE1DRAFT64944 (NEUTE1DRAFT_64944)
03009 Ribosome biogenesis [BR:
nte03009
]
NEUTE1DRAFT64944 (NEUTE1DRAFT_64944)
Enzymes [BR:
nte01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
NEUTE1DRAFT64944 (NEUTE1DRAFT_64944)
Spliceosome [BR:
nte03041
]
Complex A
U2 snRNP components
U2 related factors
NEUTE1DRAFT64944 (NEUTE1DRAFT_64944)
Complex B
NEUTE1DRAFT64944 (NEUTE1DRAFT_64944)
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
NEUTE1DRAFT64944 (NEUTE1DRAFT_64944)
Ribosome biogenesis [BR:
nte03009
]
Eukaryotic type
90S particles
Helicases
NEUTE1DRAFT64944 (NEUTE1DRAFT_64944)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
DEAD
AAA_22
HA2_N
SRP54
AAA_19
T2SSE
AAA_23
AAA_30
AAA
NB-ARC
nSTAND3
Flavi_DEAD
Motif
Other DBs
NCBI-GeneID:
20829103
NCBI-ProteinID:
XP_009852015
JGI:
Neute_matA2_64944
UniProt:
F8MPY7
LinkDB
All DBs
Position
Unknown
AA seq
774 aa
AA seq
DB search
MASHDDKGVKRSNMDDNDQDSKRIKRAENGDAAPEKYNPYLAHLNEDGNGNGTNGDFESP
LDAFERHKTTAVQAAQAEDSELNPWTGQPHSQRYFDILKVRRDLPVHKQRQEFLDMYHNT
QILVFVGETGSGKTTQIPQYVLYDELPHTNGKLIACTQPRRVAAMSVAQRVANELDVELG
QEVGYSIRFENRTGPKTMLKYMTDGQLLRESMHDHDMSRYSCIILDEAHERTLATDILMA
LLKQIAARRSDLKIIVMSATLDAQKFQSYFYNAPLLAVPGRTHPVEIFYTPEPERDYLEA
AVRTVLQIHATEPEGDILLFLTGEEEIEDACRRISLEVDDMIRESDAGPMKVYPLYGTLP
PAHQQRIFEKAPEPLRKGGRPGRKVIVSTNIAETSLTIDGIVYVVDPGFSKQKIYNPRSR
VESLLVSPISKASAQQRAGRAGRTRPGKCFRLYTEKAFKKELIEQTYPEILRSNLANTVL
ELKKLGVEDLVHFDLMDPPAPETMMRALEELNYLACLDDDGELTRLGGLASEFPLDPALA
VMLISSPEFYCSNEILSIVSLLSVPSIWVRPNNARKRADEMKMQFAHPDGDHLTLLNAYH
AYKGAETNGDDMKRWCHEHFLSYRHLSSADNVRAQLKRIMETHDISLVSTPFQDKNYYTN
IRRALLAGFFMQVAMRESSNSKVYKTVKDDQLVMIHPSTSVTSPYDWVVYNEFVLTTKQY
VRTVTNIRPEWLLEIAPVYYDLDTFEKGEIKSALTRITDKVKRRQAIKGSGSAR
NT seq
2325 nt
NT seq
+upstream
nt +downstream
nt
atggccagccacgacgacaaaggcgtcaagagatccaacatggacgacaacgaccaggac
tcgaagcgcatcaagcgtgccgagaatggcgatgctgcccccgaaaagtacaacccctac
ctcgcccatctcaacgaggacggcaacggcaacggcaccaatggcgacttcgaatcgccc
ctcgacgccttcgagaggcacaagaccaccgccgtccaggctgcccaggccgaggactcg
gagctcaacccgtggaccggccagccgcactcgcagagatacttcgacatcctcaaagtg
aggcgcgacctccccgtccacaagcagcgccaggagttcctcgacatgtaccacaacacc
cagatcctcgtcttcgtcggtgagacgggttccggaaagaccacccagatcccccaatac
gtcctctacgacgagctcccccacacgaacggcaagctcatcgcctgtacccagccccga
agagtggcggccatgtcggttgcccagcgtgtcgcgaacgagttggatgtcgaactgggc
caggaagtcggttacagcattcgtttcgagaaccggaccggccccaagaccatgctcaag
tacatgacggatggtcagctcctgcgcgagtccatgcacgaccacgacatgtcccgctac
agctgcatcattctcgatgaagcccacgaacgtaccctcgcgaccgatatcctcatggcc
ctgctcaagcagatcgccgcccgcaggtcagacctcaagatcattgtcatgtctgccacc
ctcgatgcccaaaagttccagtcctacttctacaacgccccattgctcgccgtccccggt
cgtacccatcccgtcgagatcttctatacccccgagcccgagcgtgactacctcgaggcc
gccgtacggaccgtgctccagattcacgccaccgagcccgagggagacatcttgctgttc
cttactggtgaggaggagattgaggatgcttgccgaagaatcagcttggaggtggacgac
atgattcgcgagtcggatgctggccccatgaaggtttaccctctttacggcactctccct
cctgcgcaccaacagcgcattttcgaaaaggcccccgagcccctgcgcaagggtggcagg
cctggtcgcaaggtcattgtctcgaccaacattgccgaaacgtccttgacaatcgatggt
atcgtctacgtcgtcgaccccggtttcagcaagcaaaagatttacaacccccgctctcgt
gttgagtccttgttggtttctcctatctcgaaggcctctgctcagcaaagagctggtcgt
gctggtcgtacacggcccggtaaatgcttccgtctttacaccgagaaggctttcaagaag
gaacttattgagcaaacctatcctgaaattctccggtccaacctggccaacactgttttg
gagttgaagaagcttggtgttgaggatttggtacactttgatctcatggaccctcctgcg
cccgagaccatgatgcgcgccctggaggagctcaactacctcgcctgcttagatgacgat
ggtgagcttacgcgtctcggtggtttggcttccgagttcccgcttgaccccgccctcgcc
gtcatgcttatttcgtcgcccgagttctactgctccaacgagatcctttccattgtgtcc
ctcctctccgtcccctcgatatgggtacgccccaacaacgcgcgcaagcgggccgacgag
atgaagatgcagttcgcccaccccgacggcgaccacctgacgctgctgaacgcctaccac
gcctacaagggtgccgagaccaacggcgacgacatgaagcgctggtgccacgagcacttc
ctctcataccgtcacctgtcaagcgccgataacgtccgggctcagctcaagcgtattatg
gagacgcacgacattagcctggtcagcacgccgttccaggacaagaactactacaccaac
atccgccgcgcgctcctggctggcttcttcatgcaggtggccatgcgcgagagcagcaac
agcaaggtgtacaagacggtcaaggatgaccagctcgtcatgatccacccgagcacgtcg
gtgacgagcccatacgactgggtcgtctataacgagttcgttctcacaaccaagcagtac
gtcaggacggtgaccaacattcgtcctgagtggcttcttgaaattgcccccgtctactac
gacctcgatacctttgagaagggcgagataaagtcggcgctcactcgtatcaccgacaag
gtcaagcggaggcaagccatcaagggcagcggcagcgcgcgttag
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integrated database retrieval system
