Neurospora tetrasperma: NEUTE1DRAFT74055
Help
Entry
NEUTE1DRAFT74055 CDS
T03451
Symbol
NEUTE1DRAFT_74055
Name
(RefSeq) U2 snRNP component prp10
KO
K12828
splicing factor 3B subunit 1
Organism
nte
Neurospora tetrasperma
Pathway
nte03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
nte00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
NEUTE1DRAFT74055 (NEUTE1DRAFT_74055)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
nte03041
]
NEUTE1DRAFT74055 (NEUTE1DRAFT_74055)
03036 Chromosome and associated proteins [BR:
nte03036
]
NEUTE1DRAFT74055 (NEUTE1DRAFT_74055)
Spliceosome [BR:
nte03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
NEUTE1DRAFT74055 (NEUTE1DRAFT_74055)
Complex B
NEUTE1DRAFT74055 (NEUTE1DRAFT_74055)
Complex C
U2 SnRNP specific factors
NEUTE1DRAFT74055 (NEUTE1DRAFT_74055)
Chromosome and associated proteins [BR:
nte03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
NEUTE1DRAFT74055 (NEUTE1DRAFT_74055)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SF3b1
PPP2R1A-like_HEAT
HEAT_EZ
TOR1L1_N
HEAT_EF3_N
HEAT_2
Htt_N-HEAT_1
UTP20
mTOR_dom
XMAP215_CLASP_TOG
RRP12_HEAT
Adaptin_N
UNC45-central
Motif
Other DBs
NCBI-GeneID:
20829694
NCBI-ProteinID:
XP_009857053
JGI:
Neute_matA2_74055
UniProt:
F8N3Q4
LinkDB
All DBs
Position
Unknown
AA seq
1215 aa
AA seq
DB search
MSDSDFEQIKKLQQERNAAAAAKSGSRSFDPANQRSDNSTKAKLGEIWDTDLYERNSGDK
FAGYHTTLPAADGDDEEMEDADSGRRLVGQYTATRAQIDEFARGDGVEEDDPLAGRGEKS
NRITDRETDYQKRRFDRVLTPTRADPFAANRQAGATEEGESYREIMERRELEREEERVRR
AIEQKMKEGGPVEEHQPTLQDSGNKENEEAGSTEAAAGRKRKKRWDVASTDDATPAPEPK
KRSRWDQAPSVPAPGAPGAEPKKRSRWDQAPSATPVGNVGLATPMHPTQTAVVPPAFGAD
AAGRYAPLSDEELDAMLPGPEQGYKILDPPPGYAPVRAPAHKLMQAPAPTTGFMMQDPDS
GRMTGQQVPKEIPGVGDLQFFKPEDMAYFGKLTDGADEESLSVEELKERKIMRLLLKVKN
GTPPMRKTALRQLTDNARNFGAGPLFNQILPLLMEKTLEDQERHLLVKVIDRILYKLDDM
VRPYVHKILVVIEPLLIDQDYYARVEGREIISNLSKAAGLATMISVMRPDIDHVDEYVRN
TTARAFAVVASALGIPALLPFLRAVCRSKKSWQARHTGVKIVQQIPILMGCAVLPHLKQL
VDCIGPNLNDEQTKVRTVTSLAIAALAEASNPYGIESFDDILNPLWTGARKQRGKGLAGF
LKAVGYIIPLMDEDYANYYTSQIMEILLREFASPDEEMKKVVLKVISQCAATDGVTAGYL
KEHVLDEFFKSFWVRRMALDKRNYRQVVETTVDIGQKVGVSEILERIVANLKDESEAYRK
MTVETVEKIVASLGAADIGERLEERLIDGILHAFQEQSVEDIVMLNGFGSVVNALGTRCK
PYLPQIVSTILWRLNNKSATVRQQAADLISRIAMVMKQCGEDALMGKLGIVLYEYLGEEY
PEVLGSILGALRSIVTVVGISQMQPPIKDLLPRLTPILRNRHEKVQENTIDLVGRIADRG
PESVNAREWMRICFELLDMLKAHKKGIRRAANNTFGFIAKAIGPQDVLATLLNNLRVQER
QSRVNTAVAIGIVAETCAPFTVLPALMNEYRVPELNVQNGVLKSLSFLFEYIGEMAKDYV
YAVTPLLEDALIDRDQVHRQTAASVVKHIALGVVGLGCEDAMVHLLNLLYPNLFETSPHV
IDRIVEAIEAIRMAVGPGLVLNYVWAGLFHPARKVRTPYWRLYNDAYVQCADAMVPYYPN
LIEEGIDRTELAIML
NT seq
3648 nt
NT seq
+upstream
nt +downstream
nt
atgtcggactcggattttgaacagatcaagaagctccagcaggagcgcaatgctgctgcc
gccgccaagagcggttcgcgcagctttgatcctgccaaccaacgatccgacaacagcacc
aaagccaagctgggagaaatatgggacaccgatctgtatgaacgcaacagcggcgacaag
tttgcgggctaccacaccaccctgcctgctgccgatggcgacgacgaagagatggaagat
gccgactccggccgtcgcctagtaggacagtacaccgccacccgagctcagatcgatgag
tttgcacgcggcgatggcgtcgaggaggacgatcccctggctggccggggcgaaaagagc
aaccgcatcaccgacagggagaccgactaccagaagcgccgatttgaccgcgttctgacc
cctacacgagccgacccatttgctgccaaccgccaagcaggtgccactgaggaaggcgaa
agttaccgggaaatcatggaacgccgcgagcttgagcgagaggaagagcgcgtacggcgc
gccattgaacagaagatgaaggagggcggtccggtcgaggagcaccagcctacccttcag
gattccggtaacaaggagaacgaggaggctggctctactgaagctgcggctggtcggaag
cgcaagaagagatgggatgtcgcctctacagatgatgccaccccggcaccagagcccaag
aagaggtctaggtgggatcaagcaccatctgttcccgctccaggggcgccaggggcggag
cccaagaagcgatcccgctgggaccaggcgccttctgccactcctgttggtaacgtcggc
ctagctaccccgatgcaccctacccagactgccgtcgtgcccccagctttcggcgctgat
gcggccggtcgctacgcaccactcagcgacgaagagctggacgcgatgcttccaggcccc
gaacaaggttacaagattcttgatccgccaccagggtatgcccccgtgcgagcaccggca
cacaagctgatgcaggctccggccccaacaacgggcttcatgatgcaggaccccgacagc
ggacggatgacaggccagcaggtgccaaaggagattcccggtgtgggagacctgcaattt
ttcaagcccgaagatatggcatacttcggcaagctcaccgacggagcagatgaggaaagc
ttgagtgttgaagagctcaaggagagaaagattatgaggctcttgctgaaggtcaagaac
ggtactcctcctatgagaaagactgcgctcagacaattgacagataatgctcgcaacttt
ggtgccggccccctcttcaaccaaattcttcctctgctcatggagaaaacattggaggac
caggaacgccatcttctcgtcaaggttattgatcgtatcttgtacaagctcgatgacatg
gttcgaccatacgttcacaagattctcgtcgttatcgaaccccttcttatcgatcaggac
tactatgcccgtgttgagggtcgggaaatcatttcgaacctcagcaaggctgctggtctt
gccacaatgatcagtgtcatgcgtccagatattgatcacgtcgatgaatatgtcagaaac
actactgccagagcctttgccgtggttgcctcggctctgggtatcccagctctgctcccc
ttcttgcgagctgtgtgccgaagcaaaaagtcgtggcaggctcgtcacacaggtgtcaag
attgtccagcagattcccatcttgatgggctgcgcagtcttgccccatctcaagcagctg
gttgactgtatcggacccaacctgaacgatgaacagaccaaggtccgcacagtgaccagt
ttggccatcgcagctctcgccgaggcatctaacccctacggtatcgagagcttcgatgat
attctcaaccccctttggaccggtgcccgaaagcagcgaggcaagggtctggcgggtttc
ctcaaggctgtcggttatattatcccgcttatggatgaagactatgccaactattacacc
agtcagattatggagattctgctacgagagtttgcctctcccgatgaagagatgaagaag
gttgtgctaaaggtgatttcacagtgcgccgccaccgatggagtaacggctgggtaccta
aaggagcatgtgctggacgagttcttcaagagcttctgggtacggcgtatggctctggac
aagcgcaactaccgacaggtcgttgagaccactgtcgacattggccaaaaggttggtgtc
agcgagattctggaaaggatcgtagccaacctgaaggacgagagcgaagcctatcgtaag
atgacggtggagacggttgaaaagattgtggcctctctcggtgctgccgatattggcgag
cgtctggaagaacgccttatcgatggcattcttcatgcgttccaggaacagagcgtggag
gatatcgttatgcttaacggcttcggttcggtggttaacgcattaggcacccgatgcaag
ccttaccttcctcagattgtcagcaccattctttggcgtctcaacaacaagtcagctact
gtacgacagcaagcagccgatttgatctcccgcattgccatggtcatgaagcaatgcggt
gaggatgccctcatgggtaagcttggtattgttctttacgagtatcttggtgaggagtat
cccgaggtccttggctccattcttggtgctctccgctccattgttactgtcgtgggcatc
agccagatgcagccccctatcaaggatcttctgcctcgcctgacccctattcttcgtaac
cgacacgagaaggtacaagagaacacgattgatctcgtaggtcgtattgccgatcgcggt
ccagagagtgtcaacgcccgcgaatggatgcgaatctgcttcgagcttctcgacatgctc
aaggctcacaagaagggcatcagacgtgctgccaacaacactttcggtttcattgccaag
gccattggtcctcaggatgtccttgcaacccttctgaataacctccgcgttcaggagcgt
cagtcccgtgtcaacacggccgtcgccatcggtattgttgccgagacatgcgcgcccttc
accgtgttgcctgcgctcatgaacgagtaccgcgtccccgagctcaacgttcagaacggc
gtgctcaagtcgctctccttcctcttcgagtacatcggcgaaatggccaaggactatgtc
tacgctgtcacgccactcctggaggacgccctcattgaccgtgaccaggtgcacagacaa
acagccgctagtgttgtcaagcacattgcccttggcgttgttggtctcggttgcgaggat
gccatggttcacttgctcaacttgctgtatcccaaccttttcgagaccagcccccacgtt
atcgaccgcatcgtcgaggctatcgaggccatcaggatggccgttggtccggggctggtc
ctcaactacgtctgggccggtcttttccacccggcgagaaaggtacggacaccatattgg
cgtctgtacaacgatgcatatgtccagtgcgcggacgctatggtgccgtattatcccaat
ctcatcgaggagggcatcgacaggacggagttggcgattatgctttag
DBGET
integrated database retrieval system
