Neurospora tetrasperma: NEUTE1DRAFT82300
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Entry
NEUTE1DRAFT82300 CDS
T03451
Symbol
NEUTE1DRAFT_82300
Name
(RefSeq) pre-mRNA splicing factor RSE1
KO
K12830
splicing factor 3B subunit 3
Organism
nte
Neurospora tetrasperma
Pathway
nte03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
nte00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
NEUTE1DRAFT82300 (NEUTE1DRAFT_82300)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nte03021
]
NEUTE1DRAFT82300 (NEUTE1DRAFT_82300)
03041 Spliceosome [BR:
nte03041
]
NEUTE1DRAFT82300 (NEUTE1DRAFT_82300)
03036 Chromosome and associated proteins [BR:
nte03036
]
NEUTE1DRAFT82300 (NEUTE1DRAFT_82300)
Transcription machinery [BR:
nte03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
NEUTE1DRAFT82300 (NEUTE1DRAFT_82300)
Spliceosome [BR:
nte03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
NEUTE1DRAFT82300 (NEUTE1DRAFT_82300)
Complex B
NEUTE1DRAFT82300 (NEUTE1DRAFT_82300)
Complex C
U2 SnRNP specific factors
NEUTE1DRAFT82300 (NEUTE1DRAFT_82300)
Chromosome and associated proteins [BR:
nte03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
STAGA complex
NEUTE1DRAFT82300 (NEUTE1DRAFT_82300)
TFTC complex
NEUTE1DRAFT82300 (NEUTE1DRAFT_82300)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_RSE1_1st
CPSF_A
Beta-prop_RSE1_2nd
Beta-prop_EML_2
Beta-prop_BBS7
Motif
Other DBs
NCBI-GeneID:
20830494
NCBI-ProteinID:
XP_009851166
JGI:
Neute_matA2_82300
UniProt:
F8MJR7
LinkDB
All DBs
Position
Unknown
AA seq
1192 aa
AA seq
DB search
MATTSNMFLYSLTIQPPTAVTQALLGQFSGTKEQQILTASGSRLTLLQPDPRQGKVNTLL
SHDIFGIVRAIASFRLAGSHKDYIILATDSGRITIIEYLPKTNKFQRIHLETFGKSGVRR
VIPGQYLAADPKGRACLISALEKNKLVYVLNRNSQAELTISSPLEAHKPGVLVLSLVALD
VGYANPVFAALELDYTDADQDPTGQAREEVETQLVYYELDLGLNHVVRKWSDTVDRTSSL
LFQVPGGNDGPSGVLVCGEENVTYRHSNQEAFRVPIPRRSGATEDPQRKRVIVAGVMHKL
KGSAGAFFFLLQTDDGDLFKVTIDMIEDSDGNPTGEVKRLKIKYFDTIPVATSLCILKSG
FLFAASEFGNHHFYQFEKLGDDDEELEFSSDDFPTDPTASYNPVYFHPRPLENLVLVESI
DSMNPQVDCKVANLTGEDAPQIYSVCGNGARSTFRMLKHGLEVSEIVASELPGTPSAVWT
TKLTKYDHIGETVEEVSDSGFLTTAPTLAVQQMGEDGLIQVHPKGIRHIVQGRVNEWPAP
QHRSIVAATANENQVVIALSSGEIVYFEMDSDGSLAEYDEKKEMSGTVTSLSVGQVPEGL
KRSSFLAVGCDDCTVRILSLDPDSTLEMKSIQALTAAPSALSIMSMEDSFGGSTLYLHIG
LHSGVYLRTVLDEVTGELTDTRQKFLGPKPTKLFQVSVQDQPCVLALSSRPWLGYTDPLT
KGFMMTPLSYTELEYGWNFSSEQCLEGMVGIHANYLRIFSIEKLGDNMIQKSIPLTYTPK
HLVKHPEQPYFYTIESDNNTLPPELRAKLLEQQSNGDATVLPPEDFGYPRAKGRWASCIS
IIDPISEEPRVLQRIDLDNNEAAVSAAIVPFASQEGESFLVVGTGKDMVLDPRQFTEGYI
HVYRFHEDGRDLEFIHKTRVEEPPLALIPFQGRLLAGVGKTLRIYDLGLKQLLRKAQADV
TPTLIVSLQSQGNRIIVGDLQQGITYVVYKAEGNRLIPFADDTLNRWTTCTTMVDYESVA
GGDKFGNIYIVRCPERVSQETDEPGSEIHLMHARNYLHGTPNRLSLQVHFYTQDLPTSIC
KTSLVVGGQDVLLWSGLQGTVGVFIPFVSREDVDFFQNLENHMRAEDPPLAGRDHLIYRG
YYTPVKGVIDGDLCERFSLLPNDKKQMIAGELDRSVREIERKISDIRTRSAF
NT seq
3579 nt
NT seq
+upstream
nt +downstream
nt
atggcgactacgtcgaacatgttcctgtattccttgaccatccagccacccaccgctgtc
acgcaggctctgcttggtcagttctcgggaaccaaggaacagcagattcttacggcgtct
ggatcgcgtctaaccctccttcagcctgatccccgtcagggcaaggtcaacaccctgttg
tctcatgacatcttcggcatcgtacgcgccatcgcgtcgttccgtctggccggcagccac
aaggactacattatcctcgccactgattcgggccgtattaccattatcgagtatctcccc
aagacgaacaagtttcagcgcatccacctcgagactttcggcaaatcgggcgtccgccga
gtcatccccggccagtacttagccgcagatccaaagggaagagcatgcctcatttcggca
ctcgaaaagaacaagctggtctatgttctcaaccgaaactcacaggccgagcttacaatc
tcgtcaccactggaagcccacaagccaggcgtgttggtgctatctcttgttgcccttgac
gttggttacgcaaaccccgttttcgctgcgttggaactggactacacggacgcggaccaa
gatcctacgggccaagcacgagaagaagtcgagacacagctggtatattacgagctcgat
ttgggcctgaaccacgtcgtacgcaagtggtcagatactgtcgatcgcacttcttcactt
ctcttccaagtacccggcggcaatgacggtcctagcggtgtcttggtgtgcggcgaggaa
aatgtcacctatcggcactcgaatcaagaggctttccgcgtccccatccccagacgcagc
ggtgccaccgaagatcctcagaggaagcgggttatcgtcgctggcgttatgcacaagctc
aagggaagcgcgggcgcctttttcttccttcttcagacggacgatggagatcttttcaaa
gtcaccattgacatgatcgaagatagtgacggcaaccccaccggagaggtcaagcgcctc
aagatcaagtacttcgacacgataccagtagccaccagtctttgcatcctgaagagcggc
ttcctgtttgccgctagcgagtttggaaaccatcacttttaccaatttgaaaagctcggg
gacgatgacgaggaactcgagttcagcagcgacgacttcccgacagaccctaccgcctca
tataacccggtgtacttccaccccaggccacttgaaaatctggtcctggttgagagcatt
gattcgatgaaccctcaggtcgattgcaaggttgcgaatctgacgggagaggacgcgccc
cagatctactctgtctgtggaaatggggcgcggagtactttccgcatgttgaagcacgga
ctcgaagtgtctgaaattgtcgcttcagagcttccgggtacaccttctgctgtatggacg
actaagttgaccaagtacgaccacattggcgagacggtagaagaggtcagcgatagtggt
ttcttgactacggcgcccaccctagctgtgcagcaaatgggtgaggatggcttgatacaa
gttcaccccaagggcattcgccacatcgtccaaggtcgtgtcaatgaatggcctgcacct
cagcatcgctcgattgttgctgccacggcaaatgagaatcaggttgtcatcgccttgagc
tctggcgaaatcgtctacttcgaaatggactcggatggttcgctcgccgagtatgacgaa
aagaaggagatgtcgggtaccgtcacatcgctgagcgtcggtcaagtaccggagggcctg
aagcgaagctctttcctggctgtaggatgcgatgattgcacagttcgcattcttagcttg
gaccctgattcaacactcgagatgaagtccatccaagctttgacagccgcaccctcggct
ttatcaatcatgtcgatggaggactcgttcggtggatccacgctctatctgcacattgga
ttgcattcgggcgtttaccttcggactgtgctggatgaagtgacgggcgaactgacagac
actcgtcaaaaattcttgggtcccaagcctaccaaacttttccaagtatcagttcaggat
cagccatgtgttcttgcgctgagctcgaggccatggttaggctacaccgacccacttact
aagggcttcatgatgacgcccctaagttacaccgagcttgagtatggttggaacttcagt
agcgaacagtgcttggaaggcatggttggaattcatgccaactacctaagaatcttttca
atcgaaaaactgggcgacaacatgattcagaaatccattcctttgacttacacacctaag
cacttggtcaagcatcccgaacagccatacttttacactatcgaatccgacaataacacc
ctccccccggagctgcgggcaaagcttctggagcaacaaagcaatggcgacgcaacggta
ctgccgccagaggactttggatatcccagagccaaaggcagatgggcatcgtgcatcagc
attatcgatcctatcagcgaggaaccgagagtcctccaaaggattgatcttgacaataat
gaggcggcagtcagcgcggccattgtaccttttgccagtcaagagggtgaaagtttcctg
gttgtcggcacgggcaaagatatggtcctcgacccacgtcaatttaccgagggctacatc
catgtttacagattccatgaagacggccgggacctggagttcattcataagacccgagta
gaagagccccctttggcactcattccgttccagggtcgtctgcttgctggcgtcggcaag
acactccgtatctacgacctcggtttgaagcaactgctccgaaaagctcaagcagatgtg
acgcccactctcatcgtctccctacaaagccagggtaaccgcatcattgtcggcgatctc
cagcaaggcatcacgtacgttgtctacaaggccgagggcaatagactcattccctttgct
gacgacaccttgaaccgctggacaacctgcaccaccatggtcgactacgaatccgttgcc
ggcggcgacaagttcggcaacatatacatcgtccgttgcccagagcgcgtcagccaggaa
actgacgagcctggatcagagatccacctgatgcacgcccgcaactaccttcatggcaca
cccaaccgcttgagcctccaggtccacttctacactcaggacttgccgaccagcatatgc
aagaccagcctagttgtcggtggtcaagacgtgctgctctggagcggcttgcagggcact
gtcggtgtcttcattccctttgtcagccgcgaggatgtcgacttcttccagaatctggag
aaccatatgcgcgctgaagacccgccgcttgccggccgtgatcatttgatctacaggggt
tactatacccccgtcaagggtgtgatcgatggtgacttgtgcgagaggtttagcttgctg
ccgaatgataagaagcagatgattgcgggagaacttgatcgctcggtgagggaaatcgag
cgcaagatctcggatattcgcacccggtctgccttctaa
DBGET
integrated database retrieval system
