Neurospora tetrasperma: NEUTE1DRAFT82678
Help
Entry
NEUTE1DRAFT82678 CDS
T03451
Symbol
NEUTE1DRAFT_82678
Name
(RefSeq) hypothetical protein
KO
K01148
poly(A)-specific ribonuclease [EC:
3.1.13.4
]
Organism
nte
Neurospora tetrasperma
Pathway
nte03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
nte00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NEUTE1DRAFT82678 (NEUTE1DRAFT_82678)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nte03019
]
NEUTE1DRAFT82678 (NEUTE1DRAFT_82678)
Enzymes [BR:
nte01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.4 poly(A)-specific ribonuclease
NEUTE1DRAFT82678 (NEUTE1DRAFT_82678)
Messenger RNA biogenesis [BR:
nte03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
NEUTE1DRAFT82678 (NEUTE1DRAFT_82678)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CAF1
Motif
Other DBs
NCBI-GeneID:
20830533
NCBI-ProteinID:
XP_009851328
JGI:
Neute_matA2_82678
UniProt:
F8MKP9
LinkDB
All DBs
Position
Unknown
AA seq
499 aa
AA seq
DB search
MEVDNVNFWGHLPTILDAIADAEFISLSVIGYPDAIIKANQTKEELYHELVEHSKVYHIS
KIGLTCFQYDEKQKVSAYSARSFNFAITPWFLSANIQAELIAKTVNRTFSFSYDTLQQLA
TNGWGFNEAWERGVPYLTRWEAQTVEERFLQPWETKKPLDINKLDAESQKFRAWANEQIT
SWLKEERLTNRRIALTRQSGFLYVVEALLGGHFANDIEPELCLAYLLVVDRDSRSQLVSA
FRDRLRAAENRNRLRRPILLIHSQLDMLCHFYSTFLGPLPETLDGFTKEIHDIFPRIVDS
RILYPLNNYPSHSFDRHKTSIEFISAAEEEGGPVVTPVRGFEYQNKMAEEHGLYGWYSNL
AFLKVAAKKLQKEQWLSKTRPEKTCGSMRMKTRKPSKLFFTLNPFAPNSIISRRSSICSS
VASGMTGSMVDTPPSVFGDGSEEEEEEEEEKQEASEVHRLPPWGAVFWEKFGNKLILDNG
EVLALTTSIPLRKTRIRNL
NT seq
1500 nt
NT seq
+upstream
nt +downstream
nt
atggaggtcgacaacgtcaacttctggggccatctgcccactatccttgacgcgattgcc
gatgccgagttcatctcgctttctgtgatcggttatcccgatgctatcatcaaagctaac
cagaccaaggaggagctctaccatgaattggtagaacactccaaggtttaccacatctcc
aagattggcctgacttgtttccaatacgacgagaagcaaaaggtctcagcatattctgcg
cgtagcttcaactttgccatcaccccttggtttctctctgcaaacattcaggcggaactc
atcgcaaagaccgtcaatcgaacgttttccttttcatacgacacccttcaacagttggcg
acaaacggctggggtttcaacgaagcttgggaacggggtgttccttacttgacccgctgg
gaggcgcaaacagtcgaggagcgtttcctccagccttgggagaccaagaagccattggac
atcaacaaactagatgccgagtcccagaaatttcgggcatgggccaatgagcagatcaca
tcttggctgaaagaagagagattgacgaaccgccgcattgcactgacgcgacagtcagga
tttctctacgtggtggaggctctcctcgggggacattttgccaacgacatcgagcccgaa
ctatgcttggcatacttattggtggtggatcgtgactcgcgaagtcaacttgtctcggct
tttcgcgacagacttagagcagctgagaatagaaacaggctcagacgacctatcctgctc
attcactctcagctcgacatgctgtgtcacttttactcgacatttttgggcccacttccg
gagacactcgacggattcacaaaagaaatacacgacatcttccctcggatcgtggacagc
aggattctgtatcccctcaacaactatccatctcactcgttcgacaggcacaagacttca
attgagttcatatctgccgcagaggaagagggaggacccgttgttacaccagtacgagga
ttcgaataccagaacaagatggctgaagaacacggtctttacggctggtattccaacctc
gcattcctcaaggttgcagcaaagaagctgcagaaggagcagtggctgagtaagacccgg
cccgaaaagacgtgcggaagcatgagaatgaagacgagaaaaccaagcaagcttttcttc
actctcaatccctttgcgcccaacagcattatcagccgtcggtcaagtatttgttcttct
gtcgcttccggtatgactggaagcatggttgacaccccgcccagtgttttcggtgacggc
agtgaggaggaggaggaggaggaggaagagaagcaggaggcatctgaggttcatcgtctc
cccccgtggggggcagttttctgggaaaagtttggaaacaaattgatcctcgacaacggt
gaagttttggcgctcaccacttcgattccgctcagaaagacccggattcggaatctctag
DBGET
integrated database retrieval system
