Neurospora tetrasperma: NEUTE1DRAFT84705
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Entry
NEUTE1DRAFT84705 CDS
T03451
Symbol
NEUTE1DRAFT_84705
Name
(RefSeq) hypothetical protein
KO
K14403
cleavage and polyadenylation specificity factor subunit 3 [EC:3.1.27.-]
Organism
nte
Neurospora tetrasperma
Pathway
nte03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
nte00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
NEUTE1DRAFT84705 (NEUTE1DRAFT_84705)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nte03021
]
NEUTE1DRAFT84705 (NEUTE1DRAFT_84705)
03019 Messenger RNA biogenesis [BR:
nte03019
]
NEUTE1DRAFT84705 (NEUTE1DRAFT_84705)
Transcription machinery [BR:
nte03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
NEUTE1DRAFT84705 (NEUTE1DRAFT_84705)
Messenger RNA biogenesis [BR:
nte03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
NEUTE1DRAFT84705 (NEUTE1DRAFT_84705)
U7-dependent histone pre-mRNA processing factors
NEUTE1DRAFT84705 (NEUTE1DRAFT_84705)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CPSF73-100_C
Beta-Casp
Lactamase_B
Lactamase_B_6
RMMBL
Lactamase_B_2
Lactamase_B_3
Beta_lactamase3
Motif
Other DBs
NCBI-GeneID:
20830750
NCBI-ProteinID:
XP_009852574
JGI:
Neute_matA2_84705
UniProt:
F8MNY2
LinkDB
All DBs
Position
Unknown
AA seq
853 aa
AA seq
DB search
MASKRKASAMATEPEEPVDPADELMFLNLGGGNEVGRSCHIIQYKGKTVMLDAGQHPAYD
GLAALPFFDDFDLSTVDVLLISHFHIDHAASLPYVLAKTNFRGRVFMTHATKAIYKWLIQ
DSVRVGNTSSNPQSSLVYTEEDHLKTFPMIEAIDYNTTHTISSIRITPYPAGHVLGAAMF
LIEIAGLKIFFTGDYSREEDRHLISAKVPKGVKIDVLITESTYGIASHIPRPEREQALMK
SITGILNRGGRVLMPVFALGRAQELLLILDEYWGKHAEYQKYPIYYASNLARKCMLVYQT
YVGSMNDNIKRLFRERLAESESSGDGAGKGGPWDFRFIRSLKSLDRFEDVGGCVMLASPG
MLQNGVSRELLERWAPSEKNGVIITGYSVEGTMAKQLLQEPEQIQAVMSRNIAGARRGPG
GDAEKVMIPRRCTVQEFSFAAHVDGVENREFIEEVAAPVVILVHGEVHNMMRLKSKLLSL
NATKEHKVKVFSPRNCEELRIPFKTDKVAKVVGKLASIPPSLKEAKTAHDGPLPPSTEPQ
LITGVLVQNDFKMSLMAPEDLREYAGLTTTTIACKQRLKLSAAGIDLIKWGLEGTFGAVE
ELPEVKPKLEIVKSENGDTKMEEADEELPHGDDVVAAYLVMGCVTVRYRASGEVELEWEG
NMLNDGIADAVMAVLLGIESSPAAVKRSATKNPHTHSPLPAEQNPHSHLTPEDRFFRLCM
FLEAQFGQDNVSPIVEPKLPPLSPTTKDTKAITSPSEETAKSSDAKSDADADASMDVSEE
DEDEQQLKARERAEVERLERMGIPKPGVRIKVDKMEAKVWLEDLEVECANKIFRERVRAV
VERAVEVVAPLWG
NT seq
2562 nt
NT seq
+upstream
nt +downstream
nt
atggcttccaagcggaaggcctcggcaatggcgacggagccagaggagccggtcgaccca
gcggatgaactcatgttcctcaacctcggcggaggcaacgaagtcggccgatcatgtcac
atcatccagtacaagggcaaaaccgttatgcttgatgctggtcaacacccagcatatgat
ggcctagcagcccttcctttctttgatgacttcgatctcagcacagtagatgtcctcttg
atcagccattttcatatcgaccatgccgcctcgttaccatatgtcttggccaagaccaac
ttccgaggccgtgtcttcatgacacatgccaccaaggctatctacaaatggcttatccag
gacagtgtccgtgttggcaacacatcgtcgaacccgcaatcgtcgctcgtctacaccgag
gaggaccatctcaagacctttcccatgatcgaggccatcgactacaatactacccacacc
atctcctctatccgcatcacaccatacccggccggccacgtccttggcgccgccatgttt
ctgattgagatcgctgggctcaagatcttcttcaccggcgactattcccgtgaagaagac
aggcatcttatctctgccaaagtccccaagggcgtcaagatcgatgtcctcattaccgag
tccacctacggtatcgcctcgcacatcccccgaccagaacgtgagcaggccctcatgaaa
tccatcaccggcatccttaacagaggtggccgcgtcctcatgcccgtcttcgctcttggt
cgagcccaggagctcctcctcatcctcgacgagtactggggcaagcacgccgaataccag
aaataccccatctactacgcctccaacctcgcgcgcaagtgtatgcttgtctaccagacc
tatgtcggctctatgaacgacaacatcaagcggctgttccgcgagcgtctcgccgagtcc
gagtcctccggcgacggtgccggcaagggaggaccatgggactttcggttcatccgttcc
ctcaagagtctcgaccgcttcgaggacgtcggcggctgcgtcatgcttgcctcccctggt
atgcttcaaaacggcgtcagtcgcgagctgctggagcgatgggcgccgagcgagaagaac
ggcgttatcatcaccggttactccgtcgagggcaccatggccaagcagctccttcaagag
ccagagcagatccaggccgtcatgtctcgcaacattgcgggtgcccgccgcggccccggt
ggtgatgccgagaaggtcatgatcccccgccgctgtaccgtccaggagttctcctttgcc
gcacacgtcgacggcgtcgagaacagggagttcattgaggaagtcgccgcccctgtcgtc
atcctcgttcacggcgaggtgcacaacatgatgcgtctcaagtccaagcttctttcgctg
aacgcaaccaaggaacacaaagtcaaggtgttcagccccagaaactgcgaggagcttcgc
atccctttcaagacggacaaggttgcgaaggtggtgggtaagctggcgtccatcccccct
tctttgaaggaagccaagaccgcgcatgacggacctctccccccctccaccgaacctcag
cttatcactggtgttttggtgcaaaacgacttcaagatgtctctgatggctcccgaggat
ctcagagagtatgccggtttgacgaccaccactattgcgtgcaagcagcgtttgaagctg
agtgccgctggtattgacctcatcaagtggggtctcgaaggaacctttggtgccgtcgaa
gaactccccgaagtgaagccaaagctggaaatcgttaagagcgagaacggcgataccaag
atggaagaagctgatgaggagttgccccacggtgacgacgtggtagccgcttacctggtc
atgggctgcgtcaccgtccgctaccgtgctagcggcgaggtggaactagagtgggaaggc
aacatgctcaacgacggcattgccgacgccgtaatggccgtgttgcttggcattgagagt
agtccagctgccgtgaagcgctcggccaccaaaaacccccacacccactcccctctcccc
gcggagcaaaaccctcattcacacctcacccccgaagaccgtttcttccgtctgtgcatg
tttctcgaagcccaattcggccaagacaacgtctcccccatcgtcgaacccaaacttcct
cccttgtcacccaccaccaaagacaccaaagccatcacctccccctcggaggagaccgcc
aaatcctccgacgccaagtccgacgccgacgcagacgcctccatggacgtctcggaagaa
gacgaagacgaacagcaactcaaggcacgcgaacgcgcggaggtggaaagactagagaga
atgggtattccgaaacccggggtgcgcatcaaggtggataagatggaggcgaaagtctgg
ttggaggatttggaggtggagtgtgcgaataagatctttagagagcgggtgagggcggtg
gtggagcgggcggtggaggttgtggcgccgctttgggggtga
DBGET
integrated database retrieval system
