Neurospora tetrasperma: NEUTE1DRAFT87908
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Entry
NEUTE1DRAFT87908 CDS
T03451
Symbol
NEUTE1DRAFT_87908
Name
(RefSeq) DNA-directed RNA polymerase III largest subunit
KO
K03018
DNA-directed RNA polymerase III subunit RPC1 [EC:
2.7.7.6
]
Organism
nte
Neurospora tetrasperma
Pathway
nte03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
nte00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
NEUTE1DRAFT87908 (NEUTE1DRAFT_87908)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nte03021
]
NEUTE1DRAFT87908 (NEUTE1DRAFT_87908)
Enzymes [BR:
nte01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
NEUTE1DRAFT87908 (NEUTE1DRAFT_87908)
Transcription machinery [BR:
nte03021
]
Eukaryotic type
RNA polymerase III system
RNA polymerase III
Core subunits
NEUTE1DRAFT87908 (NEUTE1DRAFT_87908)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_1
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
TRM13
Motif
Other DBs
NCBI-GeneID:
20831073
NCBI-ProteinID:
XP_009854458
JGI:
Neute_matA2_87908
UniProt:
F8MXN5
LinkDB
All DBs
Position
Unknown
AA seq
1475 aa
AA seq
DB search
MGAEQRAPIKEQLADQLPKRFRALQFGVQSHQDIVNQGVLEVSDNLLYDVENGRRTFPHG
PLDPRLGTSSKTGTCETCNLPLQSCAGHFGHVRLPLPVFHIGYLKYIQATLQNICKTCSK
VLLEEEPKAKFLKALRAPGIDNLKRSAILKKINDECRKQKTCPYCGDTQGVIRKLSVMKL
THDKFSHFNKSTAQKKVPPVAKAAFDSSFIQAKTFTPDLEKHSKKAMDDMDPLKVLKLFK
KITAEDCELLGLNPSEGRPEMFLWQYLPAPPICIRPSVQQEAASNEDDITSKLSEIILYA
GHLRESLLKGAALNTIMEQWEFIQLQVGMYVAVPERVAKNLTYPERVNRNNIEKLRKCVM
NGPKVWPGAQGVIKRDGGMKFNLNFGDESIREERARELKFGDVVERHLEDGDIVLFNRQP
SLHKLSIMSHRAKVRPWRTFRLNECVCTPYNADFDGDEMNLHLPQTEEARAEAINLMGVQ
NNLITPKNGEPIIAATQDFITAAYLLSSKDLFLDRKTFTYICTQMLLGETHLDLPPPTII
KPVELWTGKQIFNVLMRPNKQSPVLVNLEAKNKVYKAKPGELPDMDIDDCYLVVRNSEVM
CGRMDKSTVGGGKKNSVFYVILRDWGPEHAAQAMNRLAKLCARTLTLRGFSIGVGDVYPS
KDLTEHKAKLVQDAYALCDDLIAQFKSGRLEKAPGCNMEETLENKISGILSKVRSQAGDY
CVGHLSRNNSPLIMAKSGSKGSDINVAQMVALVGQQIIGGKRVADGFQDRTLFHFHKNAR
QPPSKGFVRNSFYTGLVPTEFLFHAISGREGLVDTAVKTAETGYMSRRLMKSLEDLSTQY
DDTVRTSEGNIVQFQYGADRLDPADMEGNAKPVDFERSWNHAESLTMNHNDRSLLPAEIS
AMCKEILDERRKWYVRKHLVTGELLHYEDKTIAESDDHDVFIAIDEHEGARVYLNTIQAE
MDKRALKLAKARKLAGLDPCLPQDNADLLKEFAAWEKKQNGGDIKMLDPEEEEIQQAHVD
RVAKVSEATLRKFMNLCLSKFDKAKVEPGHAVGAVGAQSIGEPGTQMTLKTFHFAGVAGM
SITQGVPRIKEIIGASKLISTPVISCELENNRDIKAARIVKGKIEKTYISDVITYVEDVW
LPDVAKIVLKIDMQALSDMQLGIGLREIMVAIVKAKKLKLKVEMDDLKIGPDNTIEVIVS
NDWKDLTAQKKAARVRAAAIEKGQLLLTTSDETAADFQLRVNFLKRMLPAVPISGYPEAF
RAIIQSSESNEHKVLVEGYGLRACMTTEGVIGTKCISNSIMECRDVLGIEAARTTIAKEI
GSVMGDMGIDPRHMDLLADVMTYKGEILGITRHGLAKMRDSVLQLASFERTPDHLFDAAA
GMKTDRILGVSECIIMGQTMKIGTGAFQVVRRLGIRDHQVRPKKSMFEEVWKKDEAEKRR
AKMEMRKTTAAAAASTGRGGKIDGMMPAAPMVAVA
NT seq
4428 nt
NT seq
+upstream
nt +downstream
nt
atgggtgccgagcagagagctcctatcaaggagcagctggccgaccagctccctaagcgc
ttcagagccctgcagttcggagtccagtcacaccaggatatagtaaatcagggtgtcctc
gaagtctccgacaacctcctgtacgatgtcgaaaacggccgccgcactttcccccacggc
cccctcgatccccgtctcggtacttcgagcaagacgggcacctgcgagacctgcaatctc
cctctccagtcctgcgccggtcacttcggtcacgtccgcctcccacttcccgtcttccac
atcggctatctcaagtacattcaggccacactccaaaacatttgcaagacctgctcaaag
gtcctgctcgaggaggaacccaaggccaagttcctcaaggctctccgtgcccctggtatc
gataacctcaagcgatcagccatcctcaaaaagatcaacgatgaatgccgcaagcagaag
acgtgcccctactgcggcgacacccagggtgttattcgcaagttgagcgtcatgaagctt
actcacgacaagttctcgcacttcaacaagtcgactgcccagaaaaaagttccgcccgtt
gccaaggccgccttcgattcctccttcatccaggcaaaaacattcactccggacctcgag
aaacactccaagaaagctatggacgacatggatcctctcaaggtcctgaaattgttcaag
aaaattaccgccgaggactgcgagttgctcggattgaacccttccgagggcagaccagag
atgttcttgtggcaatatcttcccgctcccccaatctgtattcgtccgtcggtccagcaa
gaagccgccagtaacgaggatgacattactagtaagctctccgaaatcattctctacgcc
ggccatttgcgcgaatccctcctcaaaggcgctgccctcaacaccatcatggaacagtgg
gagttcatccagctccaggttggcatgtacgttgccgttcccgagcgcgtggccaagaac
ctgacctatcccgagcgggtgaaccgcaacaacatcgaaaagttgcgaaaatgtgtcatg
aatggacccaaggtatggcctggtgctcagggcgtcatcaaaagggacggcggcatgaag
ttcaacttaaactttggtgatgagtccatccgggaggaacgcgcgcgggaactcaagttt
ggtgacgttgttgaaagacatttggaagacggcgacattgtactcttcaaccgtcagccc
tcgctacacaagttgtccatcatgagccatcgtgcaaaggttagaccctggaggacgttc
cgtctcaacgaatgcgtgtgcactccctataacgccgatttcgatggagacgaaatgaac
cttcatctcccgcaaacagaagaggctcgtgccgaagccatcaacctcatgggtgtccaa
aacaacttgattacccccaagaacggtgaacctattatcgccgccacgcaggatttcatt
actgcggcatacctcctgagtagcaaagatttgttcctcgaccgcaagacctttacctac
atctgtacgcagatgctgctgggtgaaacccatctcgaccttcccccgcctaccatcatc
aaacccgtcgagttgtggacgggcaagcagattttcaacgttttgatgcgtcccaacaag
caatcaccagtcctcgtcaacctcgaggccaagaacaaggtctacaaggcgaagccaggc
gagcttccggatatggacattgacgattgctacttggtcgtccgcaactccgaggtcatg
tgcggaagaatggacaagtcgaccgttggtggtggcaagaagaactcggtcttttatgtt
atccttcgtgattggggtccggagcacgctgctcaggccatgaaccgtctggccaagttg
tgtgctcgcacactaaccctccgcgggttttcgattggtgttggcgacgtctatccgtcc
aaggatttgacagagcacaaggctaagctggttcaggatgcgtatgcactctgcgacgac
ctcatcgcacagttcaagtctggaaggcttgaaaaggctcccggttgtaacatggaggag
acgcttgagaacaagatctctggtattctcagtaaagtccgttcgcaggccggtgactac
tgtgttggccatttgagtcgcaacaattctcccttgatcatggccaaatccggttccaag
ggttccgacatcaacgtcgctcagatggttgcccttgtcggacagcagattattggtggc
aagcgtgttgcggatggattccaggatcgtaccctcttccacttccacaagaacgctcgt
cagccccccagcaagggtttcgtgcgcaacagtttctacactggtctggtgcccactgag
ttccttttccacgccatctctggcagagaaggtttggtcgataccgccgtcaagacagcc
gagacaggttacatgtctcgtcgtctcatgaagtcattagaagatctctcaactcagtac
gacgataccgtgcggacatcagaagggaatattgtgcagttccagtacggtgccgacaga
ctggatccagcagacatggagggtaacgccaagcctgttgatttcgagagatcatggaat
catgccgaaagcttgacaatgaaccacaatgacaggtcgctgcttccggcagaaatctcg
gccatgtgcaaggaaattctggacgaaaggcggaaatggtacgtgcgcaagcaccttgtc
acgggcgagttgctgcactacgaggacaagacgattgcggaaagtgacgatcacgatgtg
ttcatcgccatcgatgagcatgaaggtgccagagtctatctcaacaccattcaggctgag
atggacaagcgtgcgcttaagctggcaaaagcacgcaaactcgccggcttggatccttgt
ctgccccaggacaacgcggacctgctgaaggaatttgctgcatgggagaagaagcaaaac
ggtggcgatatcaagatgttggatccggaagaagaagaaattcagcaagcccacgttgat
cgtgtcgccaaggtttcggaggctaccctgagaaagttcatgaacctctgtctttccaag
ttcgataaggcaaaggtggagcctggccacgccgtcggcgccgttggtgcgcaatctatc
ggtgaacccggtacgcagatgacactcaagactttccatttcgccggtgtcgccggtatg
agtatcactcagggtgttccccgtatcaaggaaatcattggcgcctcgaaactcatcagc
acgccagtcatcagctgcgagctcgagaacaaccgagacatcaaggccgcgcgcatcgtc
aagggcaagattgaaaagacttatatctcggatgtcatcacttatgttgaggatgtctgg
cttccggatgttgccaagattgtcctcaagattgatatgcaggctctttcggacatgcag
ctcggtatcggtcttcgcgagatcatggtggccatcgtcaaggctaagaagctcaagctc
aaggtggagatggacgacctcaagatcggtcccgataatactattgaggttatcgtgagc
aacgactggaaggatctgaccgcacaaaagaaggcggcgcgagttcgcgccgcagcgatt
gagaagggccaattgcttctcaccacctcggatgagaccgccgccgacttccaactgcgc
gtcaacttcctcaagcgcatgcttcctgctgtgcccatctccggctaccccgaggctttc
cgtgccatcatccaatccagcgagtccaatgagcacaaggtccttgttgaaggttacggc
ctgcgcgcctgcatgaccacggagggcgtcattggcaccaagtgtatctccaactccatc
atggagtgccgcgacgttttgggcatcgaagccgcccgcaccaccatcgccaaggaaatc
ggcagcgtcatgggcgacatgggcatcgatccccgtcacatggatttgctggccgacgtc
atgacctacaagggcgagattctcggtatcacgcgccatggtctcgccaagatgcgcgac
agcgttctgcagcttgcctcattcgagcgcacgcccgatcacttgttcgatgcggccgcg
ggcatgaagacggatcgcattctcggtgtgtcggagtgtatcattatgggccagaccatg
aagatcggtacgggagcgttccaggtcgtcagacggttgggcattagggatcatcaggtt
agacccaaaaagtccatgttcgaggaggtgtggaagaaggatgaggcagaaaagaggagg
gcaaagatggagatgaggaagaccactgcggctgcggctgcgtctaccgggcgtggggga
aagattgatggaatgatgccggcagcgcccatggtggctgttgcctaa
DBGET
integrated database retrieval system
