Neurospora tetrasperma: NEUTE1DRAFT88165
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Entry
NEUTE1DRAFT88165 CDS
T03451
Symbol
NEUTE1DRAFT_88165
Name
(RefSeq) hypothetical protein
KO
K12580
CCR4-NOT transcription complex subunit 3
Organism
nte
Neurospora tetrasperma
Pathway
nte03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
nte00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NEUTE1DRAFT88165 (NEUTE1DRAFT_88165)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nte03019
]
NEUTE1DRAFT88165 (NEUTE1DRAFT_88165)
Messenger RNA biogenesis [BR:
nte03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
NEUTE1DRAFT88165 (NEUTE1DRAFT_88165)
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
NEUTE1DRAFT88165 (NEUTE1DRAFT_88165)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Not3
NOT2_3_5_C
EAD9
DUF1192
WKF
DUF7310
Cep57_MT_bd
Transcrip_reg
Med10
Motif
Other DBs
NCBI-GeneID:
20831098
NCBI-ProteinID:
XP_009854573
JGI:
Neute_matA2_88165
UniProt:
F8MV07
LinkDB
All DBs
Position
Unknown
AA seq
657 aa
AA seq
DB search
MAARKLAQEVDKCFKKVAEGVQEFEAIYEKIEQSNNPAQKDKLEDNLKREIKKLQRLRDQ
IKTWAASNDIKDKAPLLEHRRLIETQMEKFKAVEKAMKTKAYSKEGLSAAAKLDPKEQAK
LEAGEFLSQMVDELEQQIETLEAESESIQATMKRGKGHGAKADRISEIERIIERHKWHQG
KLELIRRSLENGGVETEQVNELEESIRYYVTDGMNEDFMDDEGIYDDLNLEEEEDAYGMN
VDNDKGSSQDAQSIQDEPEPEPKPASVPAAKQRTPADTVAASSIRRSSAQLKSPLPTLAT
VHNNTMPSISNTPASNVSMKPASLPTRPAEGLKYASAAAAAAASDKSGVGIAPLPPPPTT
NSSLPASQHVKTSAANSPSVATVQPVAQERIVNVVPPAVGGSVTNTPVPSKTEPAKNVSS
RDKVSAPVPAATATTSKATPEPEAVKTQPKGRNSPHPCRSSGTNMCIVPQTNGASNGIKP
IEEVEEEESIYHLPASLQDLVESYEVTKKCPASVDALATQRMHAAAVANKPSALDTELPR
PYYPDVRYHTHNQFPQEPLAIFEDPRLYQRIDPDTLFYVFYYKQGTYQQYLAAKALKDQS
WRFHKQYQTWFQRHEEPKSITEEFEQGTYRFFDYESTWMNRRKADFKFTYKFLEDEV
NT seq
1974 nt
NT seq
+upstream
nt +downstream
nt
atggcggcccgaaagctcgcgcaagaagttgacaagtgttttaagaaggtggcagaaggc
gtgcaggagttcgaggccatctacgaaaagattgagcaatccaacaaccccgcgcaaaag
gacaagcttgaggacaatctgaaacgagaaatcaagaagctgcaaaggcttcgagaccag
atcaagacatgggccgcaagcaacgacatcaaggacaaggctcctttacttgagcatagg
cgcctgatagagacgcaaatggaaaagtttaaggccgtagaaaaggccatgaagaccaaa
gcgtattccaaggaaggcctgtcggctgcggcgaagctagaccccaaagagcaagccaag
ttggaagcaggcgaattcctcagccaaatggtcgacgagctcgaacagcagattgaaact
ctcgaggccgagagtgagtcaatacaagccaccatgaagaggggcaagggacatggcgcc
aaggccgaccggataagcgaaatcgagcgcatcattgaacgacacaaatggcatcagggg
aagctggagctaattcggcgatctttggagaacggcggcgtcgagaccgagcaagtgaac
gagctggaagaaagcatcagatactacgttaccgatggcatgaatgaggatttcatggac
gacgagggtatttacgatgacctgaacctggaagaagaagaggatgcctacggaatgaat
gtcgacaacgacaagggatcctcacaggatgcccagtcgatccaggacgagcccgagccc
gagcccaagccggcgagcgtaccggcggcgaaacaacgtaccccggctgatacagttgca
gcatcatcgatacgacgctcttctgcgcagttgaagtcgccactaccgacgttggcgacg
gtccacaacaatacaatgccaagcattagcaatacaccggcgagcaatgtgtccatgaaa
ccggcatcactgcccacgaggccggccgagggcctaaaatatgccagtgcagcagccgcg
gcagccgccagcgataagagtggtgtgggaatcgcgcccctgcccccgccgccaacaacc
aactcatcgctaccggcatcacaacacgtcaagaccagcgcagcaaactcccctagcgtt
gcaacggtgcagcctgttgcccaggagaggatagtaaatgtggtacccccggctgttggc
gggtcggttacaaatactccggtaccgagcaagactgaaccggccaagaacgtgtcttct
cgtgacaaggtatcggcaccagtcccagctgccacagcaacgacttccaaagcaacaccg
gaaccagaagccgtgaagacccagcccaaaggtcggaatagtccgcatccatgtcggagc
tcgggtactaacatgtgtatagtgccccaaacaaacggtgcaagcaatggtatcaagccc
atcgaagaagtggaagaagaggagtcgatttaccatctaccagcgtccttgcaggacctg
gtcgagtcatatgaggttaccaagaagtgcccagcatctgtggatgcacttgccacgcag
aggatgcatgcggcggcggtagcgaacaagccgagtgctctcgacactgagctaccacga
ccctactaccccgatgttaggtaccacacgcacaaccagttcccgcaggagcccctggcc
atattcgaagacccccgtctctaccagcggattgatccggacaccctcttttacgttttt
tactacaaacagggaacctaccagcagtacctcgccgccaaggcactgaaagaccaaagt
tggaggtttcacaaacagtaccagacgtggttccagcgacacgaagaaccaaaatcgatc
acggaggaattcgaacaaggaacctatcgtttctttgactacgagagcacatggatgaat
cgcaggaaggccgacttcaaatttacctacaagttccttgaggacgaagtatga
DBGET
integrated database retrieval system
