Neurospora tetrasperma: NEUTE1DRAFT89273
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Entry
NEUTE1DRAFT89273 CDS
T03451
Symbol
NEUTE1DRAFT_89273
Name
(RefSeq) hypothetical protein
KO
K14401
cleavage and polyadenylation specificity factor subunit 1
Organism
nte
Neurospora tetrasperma
Pathway
nte03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
nte00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
NEUTE1DRAFT89273 (NEUTE1DRAFT_89273)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nte03021
]
NEUTE1DRAFT89273 (NEUTE1DRAFT_89273)
03019 Messenger RNA biogenesis [BR:
nte03019
]
NEUTE1DRAFT89273 (NEUTE1DRAFT_89273)
Transcription machinery [BR:
nte03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
NEUTE1DRAFT89273 (NEUTE1DRAFT_89273)
Messenger RNA biogenesis [BR:
nte03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
NEUTE1DRAFT89273 (NEUTE1DRAFT_89273)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CPSF_A
Beta-prop_RSE1_1st
Motif
Other DBs
NCBI-GeneID:
20831204
NCBI-ProteinID:
XP_009855308
JGI:
Neute_matA2_89273
UniProt:
F8N2V1
LinkDB
All DBs
Position
Unknown
AA seq
1437 aa
AA seq
DB search
MQCYTELTPPTAVTHSVTLQLVPGQGTNLAVAKASLLQIFKTKVVSAEIDTYATLNGTNT
SSKAATAGRYDSRLVNDDDGFEASFLGGDNIAARADRANSAKLVLVAEVTLPGTITGLAR
IKKPSGSSSGGADCLLLSFRDARLSLVEWNVERNTLETVSIHYYEKEELVGSPWVAPLHQ
YPTLLVADPASRCAALKFSERNLAILPFKQPDEDMDMDNWDEELDGPRPKKDLSGAVANG
ASTIEDTPYSPSFVLRLSKLEASLLHPVHLAFLHEYRDPTIGVLSSTKTASNSLGHKDHF
TYMVFTLDLQQRASTTILAVNGLPQDLFRVVALPAPVGGALLVGANELIHIDQSGKSNGI
AVNPLTKQTTSFSLVDQSDLDLRLEGCAIDVLAAELGEFLLILNDGRLGLITFRIDGRTV
SGLSIKMLAPEAGGSVIQSRVTSLSRMGRSTVFVGSEEGDSVLLGWTRRQGQTQKRKSRI
QDADLDLDLDDEDLEDDDDDDLYGEESTSPEQAMSAAKAIKSGDLNFRIHDRLLSIAPIQ
KMTYGQPVTLPDSEEERNSEGVRSDLQLVCAVGRGKASALAIMNLAIQPKIIGRFEFPEA
RGFWTVCAKKPIPKTLVGDKGPMNNDYDTSGQYHKFMIVAKVDLDGYETSDVYALTAAGF
ESLTGTEFEPAAGFTVEAGTMGKDSRILQVLKSEVRCYDGDLGLSQIVPMLDEETGAEPR
VRTASIADPFLLLIRDDFSVFIAEMSPKLLELEEVEKEDQILTSTKWLAGCLYTDTSGLS
ADYAARKGTAKESVAEILVADLGDTTHKSPYLILRHANDDLTLYQPYRLKATAGQPFSKS
LFFQKVPNSTFAKAPEEKPVDDDEPHNAQRFLPMRRCSNISGYSTVFLPGSSPSFILKTA
KSSPRVLSLQGSGVQAMSSFHTEGCEHGFIYADTNGIARVTQIPTDSSYAELGLSVKKIP
VGVDTQSVAYHPPTQAYVVGCNDVEPFELPKDDDYHKEWARENITFKPMVDRGVLKLLSG
ITWTVIDTVEMEPCETVLCVETLNLEVSESTNERKQLIAVGTALIKGEDLPTRGRVYVFD
IADVIPEPGKPETSKKLKLVAKEDIPRGAVTALSEVGTQGLMLVAQGQKCMVRGLKEDGT
LLPVAFMDMNCYVTSVKELPGTGLCLMADAFKGVWFTGYTEEPYKMMLFGKSSTRMEVLN
ADFLPDGKELYIVASDADGHIHILQFDPEHPKSLQGHLLLHRTTFNTGAHHPTSSLLLPA
VYPNPSSLSSNSEENSPHILLLASPTGVLATLRPLQENAYRRLSSLAVQLTNGLPHPAGL
NPKGYRLPSPSASASMQLPGVDAGIGRNIVDGKILERFLELGTGKRQEMAGRAGYVVGTG
AHGVNPAGSGKMMGGGGGLSLAGVRLNGLHGQEGGMEWEEVRGELGVVLGWSGLGYF
NT seq
4314 nt
NT seq
+upstream
nt +downstream
nt
atgcaatgctatacagagttgacgccgcctacggctgtcacccattcagtaaccctccag
ctcgtccctggtcagggcactaatctcgccgtcgcaaaagcgtcgttactccagatcttc
aagaccaaagtcgtttccgccgagatcgatacctacgctacactcaatgggacaaataca
tccagcaaggctgccacggccggccgctacgatagcaggctcgtaaacgacgatgacggc
tttgaggcctcgttcctgggaggagataatatcgccgcaagggccgatcgtgccaacagc
gccaagctggttcttgttgccgaggtcaccctacccggcaccataacaggtcttgcccga
atcaagaagcccagcggcagctcgtctggcggcgccgactgcttgctcctttccttccgc
gatgcccgccttagtctggtcgagtggaacgtcgaacgcaacacgctcgagaccgtctca
atccactactacgaaaaagaggagctcgtaggaagtccgtgggtcgcgccactgcatcag
tatcccactctgttggtcgcagacccagcgagtaggtgcgctgcgctcaagttcagcgaa
aggaacttggccatattgcccttcaagcagccggatgaggacatggacatggataactgg
gatgaagagctggacggccccaggcccaaaaaggacctttccggcgccgtcgcaaatgga
gctagcactatagaagacacaccatattcaccatctttcgtccttcgcctctccaaactt
gaagctagtctccttcatcctgtgcatctcgccttcctgcatgagtatcgagaccccacc
attggtgtcctgtcctccaccaagaccgcctccaactcgcttggtcacaaggaccacttt
acatacatggtcttcaccctagacctccagcaaagggcgtcaaccaccatcctggctgtc
aatggcctgcctcaggatctctttcgtgttgtcgcccttccggcacccgtgggtggtgct
ctgctcgtaggagccaacgaactcattcatattgaccagtctggcaaatcaaatgggatt
gctgtcaacccccttaccaagcagaccacctcttttagtcttgtcgaccaatccgacctg
gaccttcgtctcgaaggctgcgctatcgacgtcttggcggcagaactcggggagttcctc
ctgattcttaacgacggacgcctggggctcatcaccttccgcatcgacggccgtacggta
tcgggcctgagcatcaagatgctagccccagaagcgggaggtagtgttatccagtcccgt
gttacttcgctgtcccggatggggaggtctaccgtgtttgtgggctccgaagaaggtgat
tccgtcttgcttggctggactaggagacagggccaaacgcagaagaggaaatcgcgaatc
caggatgccgatctggacttggaccttgacgatgaagatctcgaggacgacgacgacgat
gacttgtatggcgaggagtcgacttctccagagcaagccatgtccgccgccaaagccatc
aaaagcggagatctcaacttccgcatccacgaccgactcctgagcatcgcaccaatacaa
aagatgacatatggtcaacccgtcacattacccgacagcgaggaggaacgaaactctgaa
ggtgttcgcagcgacctccaactggtctgtgccgtgggacgaggaaaagccagcgcactt
gccatcatgaacctggcgatacaaccaaagatcattggaagattcgagttcccagaggca
agaggattttggacagtgtgtgccaagaagcccattccaaaaaccctggtgggtgataag
ggccccatgaacaatgactacgacacctctggacagtaccacaagttcatgatcgtagcc
aaagtggaccttgacgggtatgaaacgtctgatgtgtatgcccttacggcagctggcttt
gagagtctcaccggaacagaattcgagccggctgctggttttacggtggaggcagggacc
atggggaaggactccagaattctccaagtcctcaagtcagaagtacgctgctatgacgga
gacctggggctaagccagattgtgcctatgctcgacgaagagacaggagcggaaccgcgg
gttcggactgccagcattgctgacccattccttcttctcattcgggacgactttagcgtg
ttcatcgcggaaatgagcccaaagctcttggaacttgaagaggttgagaaggaggatcag
atcttgaccagcacaaagtggttggccggatgcttgtacaccgacacctccggactttct
gccgactatgccgccaggaaaggcacagctaaagagtctgttgcggagatcttggttgct
gatttgggcgacacgactcacaaatcaccatatcttatccttcgccatgctaatgatgat
ctcacactataccaaccctaccggctcaaggctactgctggacagcctttctcaaaatcc
ctcttcttccaaaaagtacccaactcaacctttgccaaagcccccgaggagaagccagta
gacgatgacgagcctcacaatgcacagcgcttccttcctatgcggcgctgcagcaacatt
tctggctatagtaccgtcttccttcctgggtcgtcgcccagcttcatcttgaagacagcc
aagtccagtcccagggttctgagcctacagggatccggtgttcaagccatgagctctttc
cacaccgaaggttgcgagcatggctttatctacgccgataccaacgggatcgctagggtg
acacaaattcctacagacagcagctacgccgaacttggtctctccgtcaagaagatcccc
gtaggagttgacacgcagtcggtggcttaccatccgcctacgcaggcctatgtggtgggc
tgcaacgacgtcgagccatttgagctacccaaagacgacgattaccacaaggaatgggca
cgcgagaatatcacgttcaagcccatggttgatcgcggcgtactaaaattgcttagtggg
atcacttggactgtcatcgacaccgtggagatggagccgtgcgagacagttctttgcgtc
gagacactcaaccttgaagtgtcggagtcgaccaacgagcgcaaacagctcattgctgtc
ggcaccgctctcatcaagggcgaagatcttccaaccagaggccgcgtctacgtctttgat
attgccgacgtcatccccgagcctggcaagcctgagactagtaagaagctgaagctggtc
gccaaggaggatatcccgcgcggcgcggtcacagcactctccgaggtgggtacccaaggt
ctgatgctcgtcgcgcagggccaaaagtgtatggtgcgcggtctcaaggaagacgggacc
ctcttgcccgtggcgtttatggatatgaactgttacgtcacgagtgtcaaggagctgccc
ggcacgggactctgtctgatggccgacgccttcaagggcgtgtggttcacgggttatacg
gaagagccttacaaaatgatgctattcggcaagagctccactaggatggaggtgttgaat
gcggatttcctgcctgatggaaaggaactttacatcgtggctagcgatgcagatggtcac
attcacattctgcaatttgaccccgagcatcccaaatccctccaaggccatctcctcctc
caccgcacaaccttcaacaccggcgcccaccaccccacttcttccctcctcctccccgcc
gtctaccctaacccctcctccttgtcttccaactcggaagaaaactctccacacatactc
ctcctagcctcccctactggcgtccttgccaccctccgcccccttcaagagaacgcctac
cgccgcctttcctctctagcagtgcaacttactaacggcctcccccacccggcgggcctc
aaccccaagggctaccgcctgccctcaccatccgcctcggccagcatgcagctgcctggc
gtggacgcaggtatcggcaggaacattgtcgacggtaaaatcctggagcggttcttggag
ctggggacgggcaaacggcaagaaatggcgggacgggccgggtacgtggttggtaccggt
gcacatggggtcaatccagcggggagtgggaagatgatgggaggtggtggtgggttgagt
ttggcgggagtgaggttgaacgggttgcatgggcaggaaggagggatggagtgggaggag
gtcagaggggagttgggagtggtgctcgggtggagtgggttgggctatttttga
DBGET
integrated database retrieval system
