Candidatus Nitrosacidicoccus tergens: NSCAC_0105
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Entry
NSCAC_0105 CDS
T06962
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
ntg
Candidatus Nitrosacidicoccus tergens
Pathway
ntg00300
Lysine biosynthesis
ntg00470
D-Amino acid metabolism
ntg01100
Metabolic pathways
ntg01110
Biosynthesis of secondary metabolites
ntg01120
Microbial metabolism in diverse environments
ntg01230
Biosynthesis of amino acids
Module
ntg_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
ntg00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
NSCAC_0105 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
NSCAC_0105 (dapF)
Enzymes [BR:
ntg01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
NSCAC_0105 (dapF)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DAP_epimerase
PhzC-PhzF
Motif
Other DBs
NCBI-ProteinID:
CAB1274311
UniProt:
A0A7G1Q7F9
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All DBs
Position
1:94390..95232
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AA seq
280 aa
AA seq
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MDIAFTKMQGLGNDFVVINTISQPISLTSTQIKYIADRRLGIGCDQVLLITPPPSSQVDF
GYRIFNQDGGEVEQCGNGARCFAHFIHHHDLSNKNILRVATKGGVIQLRREENECVTVDM
GIPRFDPKQIPFKVNAEALFYPLTVANQSIKIGAVSMGNPHCVLQVPDITTAPVGAWGLE
LESHPLFPQRVNVGFIEKISSHEINLRVYERGVGETPACGTGACAAVAVGRKQGWLDESV
SVHLLGGSLHIIWQGENSPLLMTGPSKVVFEGSITLNISN
NT seq
843 nt
NT seq
+upstream
nt +downstream
nt
atggatattgcttttactaagatgcaagggttaggcaatgattttgtggtcattaatact
atttctcaacccatatcccttacttctactcaaattaagtatattgctgatcgtcgacta
ggaatcggttgtgatcaagtattactcattacacctcctccctccagccaagttgatttt
ggctatcgaatttttaatcaagatggcggagaagtggaacaatgtggtaatggagcacgc
tgttttgctcactttatccatcatcatgatctaagtaataaaaatatactgcgtgtagct
accaagggaggagtgattcaactccgaagggaggaaaacgagtgtgttacagttgatatg
ggtattccacgttttgatcccaagcaaattccctttaaagtaaatgcagaagcattattt
tacccattaactgtagctaaccaatctataaagattggtgcagtatccatgggtaatccc
cattgcgtattacaagtcccagatattactacagcacctgtaggggcttgggggttagaa
ttagaatcccaccccttgtttccacaacgagttaacgtaggtttcatagaaaaaatatct
tcccacgaaattaatttaagagtttatgaacgaggtgttggagaaacacctgcttgtggt
actggagcttgtgctgcagtagcagtaggtagaaagcagggctggcttgatgaatcagtt
tcagtacatttacttggaggatctttacatattatttggcagggagaaaatagcccatta
cttatgaccggaccttcaaaagttgtttttgaaggttcaattacactcaatataagcaat
taa
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