Candidatus Nitrosacidococcus tergens: NSCAC_0141
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Entry
NSCAC_0141 CDS
T06962
Symbol
hupA
Name
(GenBank) HU, DNA-binding transcriptional regulator, alpha subunit
KO
K03530
DNA-binding protein HU-beta
Organism
ntg
Candidatus Nitrosacidococcus tergens
Brite
KEGG Orthology (KO) [BR:
ntg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ntg03032
]
NSCAC_0141 (hupA)
03036 Chromosome and associated proteins [BR:
ntg03036
]
NSCAC_0141 (hupA)
03400 DNA repair and recombination proteins [BR:
ntg03400
]
NSCAC_0141 (hupA)
DNA replication proteins [BR:
ntg03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
NSCAC_0141 (hupA)
Chromosome and associated proteins [BR:
ntg03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
NSCAC_0141 (hupA)
DNA repair and recombination proteins [BR:
ntg03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
NSCAC_0141 (hupA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_1
HU-CCDC81_euk_2
Lmo2446-like_N
Motif
Other DBs
NCBI-ProteinID:
CAB1274383
UniProt:
A0A7G1Q7I4
LinkDB
All DBs
Position
1:133168..133452
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AA seq
94 aa
AA seq
DB search
MNKTELVNFVASKANLSQKESHHAVDSFLHTITETLKKKETISLIGFGSFSVQTRAARSG
RHPKTGEEITIKAANIPAFKAGKILKESVQKKKK
NT seq
285 nt
NT seq
+upstream
nt +downstream
nt
atgaataaaacagaattggttaatttcgttgcttcaaaagcaaatttatctcaaaaagaa
tcccatcatgcagtagattcttttttacatactattactgaaacactaaagaaaaaggaa
acgatcagtttaattggttttggttctttttcagtgcaaactagggcagctcgttcagga
aggcaccctaaaaccggtgaagaaatcactataaaagcagcaaatatccctgcttttaaa
gcaggaaaaattcttaaagaatcggttcaaaagaaaaagaagtaa
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