Candidatus Nitrosacidococcus tergens: NSCAC_0203
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Entry
NSCAC_0203 CDS
T06962
Name
(GenBank) DNA polymerase III epsilon subunit (modular protein)
KO
K14159
ribonuclease HI / DNA polymerase III subunit epsilon [EC:
3.1.26.4
2.7.7.7
]
Organism
ntg
Candidatus Nitrosacidococcus tergens
Pathway
ntg03030
DNA replication
ntg03430
Mismatch repair
ntg03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ntg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
NSCAC_0203
03430 Mismatch repair
NSCAC_0203
03440 Homologous recombination
NSCAC_0203
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ntg03032
]
NSCAC_0203
03400 DNA repair and recombination proteins [BR:
ntg03400
]
NSCAC_0203
Enzymes [BR:
ntg01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
NSCAC_0203
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.4 ribonuclease H
NSCAC_0203
DNA replication proteins [BR:
ntg03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
NSCAC_0203
RNase H
NSCAC_0203
DNA repair and recombination proteins [BR:
ntg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
NSCAC_0203
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_H
RNase_T
RNase_H_2
RVT_3
DNA_pol_A_exo1
TPR_11
TPR_1
Motif
Other DBs
NCBI-ProteinID:
CAB1274505
UniProt:
A0A7G1Q7G4
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All DBs
Position
1:188089..189243
Genome browser
AA seq
384 aa
AA seq
DB search
MIEKIKIFTDGACLGNPGPGGWGALICYQGKKEEISGAEFNTTNNRMELTAAIKALNKAL
ELAPNSIDITTDSEYLRQGITQWIFNWKQRGWKTNQNRSVKNIDLWQKLDEIVTEYEKIE
WHWVRSHNGHPENERADFIARNAIKKTHPENVDRQVVFDTETTGLKPEEGHRVIEIGCIE
LINRRKTGSTFHRYINPGREIDAEAIKIHGLTNEFLVNQPSFSEIADDFVSFICGSELIA
HNASFDIGFLNSELKRVNIEWEGISSYCTVIDTLRLARQRHPGQKNNLDSLCKRYGIDNT
HRELHGALLDSELLAEVYLAMTRGQEGLKFGITQSSYDHQKEQPHQEEIHRISTDRARLK
VLEPNEEEKLAHKQWLVNHSTFSW
NT seq
1155 nt
NT seq
+upstream
nt +downstream
nt
atgattgaaaaaataaaaatttttacagatggagcttgtttaggaaatccaggccctggc
ggctggggtgctctgatttgttatcaagggaaaaaagaggaaatatctggagctgaattt
aataccacaaataaccgtatggagcttactgctgctattaaagcacttaacaaagcacta
gagttagcacctaattcaattgatattactactgattctgaatatttacgccaaggaatt
acgcagtggatattcaattggaaacagcgaggatggaaaacaaatcaaaatcgatctgta
aaaaatatagatttgtggcaaaagcttgatgaaattgttacagagtatgaaaaaatagaa
tggcattgggtgcgtagccataacggtcacccagaaaatgagcgagcggattttattgca
agaaatgcaattaaaaaaacccatccagaaaatgtagatcggcaagttgtatttgataca
gaaactactggattaaagcctgaagaagggcatagagtgattgaaatcggttgtattgag
cttattaatcgccgtaaaacaggcagtacattccataggtatattaacccagggcgagaa
attgatgcagaggcaataaaaattcatggattgactaatgagtttttagtaaatcagcca
tctttttcagaaattgctgatgattttgtttcgttcatctgcggatcagaactaattgct
cataatgcttcatttgatattggtttcttaaacagtgaattaaagagagttaatatagaa
tgggagggaataagttcttactgtacagtaatagatacactccggttagcacgacagcgt
catccagggcaaaaaaataatttagattctctatgcaaacgttatggaattgataatact
catcgagaactacatggtgctcttttggattcagagttacttgctgaagtatatctagct
atgacaagagggcaagaaggcttaaaatttggaataacccagtcttcttatgaccaccaa
aaagagcaaccacatcaagaagagattcatcgtatttcaactgatcgagcaagactgaaa
gtattagaaccaaatgaagaggaaaaattagctcataaacagtggctagtaaatcatagt
actttttcatggtag
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