Candidatus Nitrosacidococcus tergens: NSCAC_0249
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Entry
NSCAC_0249 CDS
T06962
Symbol
rluD
Name
(GenBank) 23S rRNA pseudouridine synthase
KO
K06180
23S rRNA pseudouridine1911/1915/1917 synthase [EC:
5.4.99.23
]
Organism
ntg
Candidatus Nitrosacidococcus tergens
Brite
KEGG Orthology (KO) [BR:
ntg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ntg03009
]
NSCAC_0249 (rluD)
Enzymes [BR:
ntg01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.23 23S rRNA pseudouridine1911/1915/1917 synthase
NSCAC_0249 (rluD)
Ribosome biogenesis [BR:
ntg03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
NSCAC_0249 (rluD)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
TTC3_9th
TruB_N
Motif
Other DBs
NCBI-ProteinID:
CAB1274599
UniProt:
A0A7G1Q7V7
LinkDB
All DBs
Position
1:complement(236722..237678)
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AA seq
318 aa
AA seq
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MKEVIQENTTIPLELGGKRLDQALVQTFPQYSRTRIQAWIKDGQIKINNTLARPRDIVSG
GEVVILHTEIEAKVEWRPQPLPLHIVYEDEALIVINKPANLVVHPAVGNYDGTLVNGLLN
YASELEVIPRAGLVHRLDRDTTGLLVVAKTIPAHTSLVQQLQSHKIRREYRAITMGVMTS
GGVIRASIARHSIDRKKMAVSDSGKPAVTYYRVLSRFQTHTYVTCLLETGRTHQIRVHLS
YINYPLLGDPVYGRRLQIPEKSNEMLIDGLRNFKRQALHAVRLGLTHPLSGQEMTWEAPL
PEDMKNILTLLKENNDLK
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
atgaaagaagtgatacaagaaaatactactattcctctagaattaggagggaagcgttta
gatcaagctttagtacaaacttttcctcaatattctcgcactcgtattcaagcatggata
aaagatggtcaaataaaaattaataataccttagctcgtcctcgagacatagtatcaggc
ggagaggttgtaatactacatacagaaatagaagctaaagttgagtggagaccccaacca
ttgccacttcatattgtttatgaggatgaagcccttatcgttattaataagccagctaac
ttagtagtacatccagccgtaggcaattatgatggtactttagtcaatgggttgttaaac
tatgcttctgagttagaagtaataccacgagcagggcttgttcatcgactagatagagat
actacgggtcttttagtagtagctaaaactatcccagctcatactagcctagtgcagcag
ttgcagagtcataaaatacgcagagaatatcgagctattactatgggtgttatgacaagt
ggtggtgttattagagcatctatagctcgccattctattgatagaaagaaaatggcagta
agtgattctgggaaaccagcagttacctactatagggtactatctcgttttcagacccat
acctacgtaacctgtcttttagagacgggtagaacgcatcaaattcgagttcatttgtct
tatatcaattaccccttacttggagatcctgtttatggtaggcgtctccaaattccagaa
aaaagtaacgaaatgcttattgatggactacgtaattttaaacgacaagcactgcacgct
gttcgtttggggcttactcacccattaagcgggcaagaaatgacttgggaagcaccactt
ccagaagatatgaagaatatacttactctgcttaaagagaataatgatttaaaataa
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