Candidatus Nitrosacidococcus tergens: NSCAC_0577
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Entry
NSCAC_0577 CDS
T06962
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
ntg
Candidatus Nitrosacidococcus tergens
Brite
KEGG Orthology (KO) [BR:
ntg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ntg03016
]
NSCAC_0577 (truB)
Enzymes [BR:
ntg01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
NSCAC_0577 (truB)
Transfer RNA biogenesis [BR:
ntg03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
NSCAC_0577 (truB)
Prokaryotic type
NSCAC_0577 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
HTH_40
Motif
Other DBs
NCBI-ProteinID:
CAB1275259
UniProt:
A0A7G1Q8M7
LinkDB
All DBs
Position
1:577489..578418
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AA seq
309 aa
AA seq
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MEKQNQLKSQNIIHGMVLLDKPIGISSNAALQQVKRVYQVRKAGHTGSLDPMASGLLPIC
LGEATKLSQFILDADKHYLVRCRLGVTTTTGDSEGEIIKTTPVQTFDWKFVENILKRFIG
AQEQIPPMYSAIKYHGQPLYKLARQGLEIKRSPRKIIIYNIKLTEVTEACLSFEVSCSKG
TYIRTLVEDIGHALECGAHTTMLRRIQVGNFNDSDIVSLDQLKNLAETNKDKLNALVLPP
RDILRNFPEISIIPHLAHCLRQGQTVPISQLFSQGLVRLVEDNKDFFGIGKIVNHNQVAP
YRLLFVSNG
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaacaaaatcagttaaagagtcaaaatattatccatggtatggttttgttagat
aaacctatagggattagctctaacgctgctttacaacaggtaaaacgagtttatcaggta
cgtaaagcaggacatacagggagtttagatccgatggcaagtggattactgcctatttgt
ttaggagaggcaactaaactttctcaatttatcttagatgcagataagcactatttagtc
cgttgccgtttaggagtaacaactactacaggtgattctgaaggcgagataataaaaaca
actccagtacaaacctttgattggaagtttgttgaaaatatcttaaagaggtttattgga
gctcaagaacaaatacctcccatgtactcagcaattaagtatcatggtcaaccactatat
aagttagcacgccaagggcttgaaattaaaagatctcctcgtaaaattatcatttataat
ataaaacttactgaagtgacagaagcttgtttaagttttgaagtttcctgctctaaagga
acttatattcgtactttagtagaagatattggtcatgctcttgaatgtggtgcacataca
acgatgcttcgacgtatccaagtaggtaattttaatgattctgacatagtatctcttgat
caattgaaaaatcttgctgaaacaaataaagataagttaaatgcattggttttacctcca
agagatattcttagaaactttcctgaaattagtattattccccatttggcccattgtctt
cgtcaaggacaaaccgtacctatttctcaattgttttctcaaggattggtacgtttagtt
gaagataataaagatttttttggaataggtaagattgtgaatcataaccaagtagcccca
tataggctattatttgtttctaatggttag
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