Candidatus Nitrosacidococcus tergens: NSCAC_0579
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Entry
NSCAC_0579 CDS
T06962
Symbol
pnp
Name
(GenBank) polynucleotide phosphorylase/polyadenylase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
ntg
Candidatus Nitrosacidococcus tergens
Pathway
ntg03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ntg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NSCAC_0579 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ntg03019
]
NSCAC_0579 (pnp)
03016 Transfer RNA biogenesis [BR:
ntg03016
]
NSCAC_0579 (pnp)
Enzymes [BR:
ntg01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
NSCAC_0579 (pnp)
Messenger RNA biogenesis [BR:
ntg03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
NSCAC_0579 (pnp)
Transfer RNA biogenesis [BR:
ntg03016
]
Prokaryotic type
tRNA degradation factors
NSCAC_0579 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
S1_RRP5
S1_TP0910
KH_2
KH-I_KHDC4-BBP
OB_RRP5_4th
OB_PDCD11
S1_2
Motif
Other DBs
NCBI-ProteinID:
CAB1275263
UniProt:
A0A7G1Q8V0
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All DBs
Position
1:578802..580889
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AA seq
695 aa
AA seq
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MTPVKKVIEYGDHTLTIETGYMARQATGAVIVHYGETTVLVTAVGVKEVSENRDFFPLTV
NFQEKSYAAGKIPGGFFKREGRPTERETLVSRLIDRPLRPLFPKGFTNEVQVVATVLSSD
GENDSDIPAIIGASTALAISGIPFSAPIAAARVGYINGQYVLNPTTSEAKKSALDLVVAG
TEKAVLMVESEAKELPEEIMLGAVMFGHQEMQGVIQTIRELAAEIGKAPWSWQPPLEDTD
LQLAVEEIGKKHLENAYQIQSKQDRQEHVAVARELIVQQLIPDESSKWSADQVSVAINRL
EKNLVRGQIISGKQRIDGRNRNEVRPINIMVGLLPRTHGSALFTRGETQALVTTTLGTER
DAQVIDAIDGEYRERFMLHYNFPPFCVGEVGMVGAPKRREIGHGRLAKRSISAVIPSEED
FPYVIRVVSEIMESNGSSSMATVCGTSLSLMDAGIPIKSPVAGIAMGLIKEEDQFAVLSD
ILGDEDHLGDMDFKVAGTTKGVTALQMDIKIDGITEEIMRTALSQAREGRFHILNEMNKA
ISTPRGEMSEYAPRMVTFKVNPDKIRDIIGKGGATIRTLTEETGATIDISDDGTVKIFST
DKANGLEAKRRVEQIVSDIEVGKIYEGKVSRLMDFGAFVTILPGKDGLLHISQISDERVN
HVSDKLSEGDIVRVKVLEVDKQGRIRLSIKAIKEE
NT seq
2088 nt
NT seq
+upstream
nt +downstream
nt
gtgactccagttaaaaaagtaattgaatatggcgatcatacgcttactattgaaaccggc
tatatggcacggcaagctactggagctgtaattgtccattatggtgagactactgtatta
gtaactgcagtaggcgtgaaagaagttagtgaaaatcgggatttttttccattgactgta
aatttccaagaaaaatcctatgctgcaggtaaaataccaggtggtttttttaagcgagaa
ggtagacctacagaaagagaaactttagtttctcgtcttattgaccgtcctctacgtcct
ttatttccaaaaggatttactaatgaagtacaagtagttgctactgtcctttcttcagat
ggagaaaatgactcagatattcctgctattatcggagcatctaccgcacttgctatttct
ggtattccatttagtgcccctattgcagctgcaagggttgggtatatcaatggacaatat
gtacttaacccaactactagcgaggctaaaaaatcagcactagatttagtagttgctggt
acagaaaaagcagttcttatggtggaatcagaagctaaagagttgcctgaagagattatg
ttaggtgcggtgatgtttggtcatcaagaaatgcagggagtcattcaaacaattagagag
ctagctgcagaaattggaaaagcaccttggagttggcaacctcctttagaggatactgat
ttacagttagcagttgaggagattggaaaaaagcatttagaaaatgcctaccaaatccag
tcgaaacaagatcgccaagagcatgtagcagtagcacgagaacttatagtacaacaattg
ataccagatgagagctcaaaatggagtgctgatcaagtatcagtagccattaatcgttta
gaaaaaaaccttgtaagaggacaaattatttctggaaagcaacgaattgatggtcgcaat
agaaatgaagttcgacctattaatattatggttggattattacctagaacccatggatcc
gcactttttactcgaggagaaacccaagcgttagtcactactactttaggtaccgagcgg
gatgcacaggtaattgatgccattgatggagaataccgagagcggtttatgcttcattat
aattttccacctttttgtgtgggcgaggtgggtatggtgggtgcaccaaaacggcgagaa
attggccatggtaggcttgctaaacggagtattagtgcagttatacctagcgaagaagat
ttcccctatgtaattcgagttgtatccgaaattatggaatctaatggttctagctcaatg
gcaactgtatgtggtacaagtctttccttaatggacgcaggtattccaattaaatctcct
gtagctggaattgctatgggattaattaaagaagaggatcagtttgcagtactgagtgat
attcttggtgacgaagaccatcttggtgatatggattttaaagtagcaggtacaacaaag
ggagtgacagccctacaaatggacataaaaattgatggaattaccgaagagataatgcgt
actgctttatctcaagctagggagggacgatttcatatcttaaatgaaatgaataaagct
atttctactcctcgaggggaaatgtctgagtacgctccacgcatggtaactttcaaagtt
aatcctgataaaattcgggatattatcggtaaaggtggcgcaacaatacgtaccctaact
gaggaaacaggggctactattgatattagtgatgatggcacagtaaaaatattttctact
gataaagcaaacgggctagaagcaaagcgtagagtagaacaaattgtatctgatatagaa
gttgggaagatctatgagggaaaagtatctaggttaatggattttggcgcttttgttact
attctccccggtaaagatggcttacttcatatttctcaaatttcagatgaaagggtaaat
catgtgagtgataaactctcagaaggagatatagttcgtgtaaaagttttagaagtggat
aagcagggcagaattcgcctaagcataaaagcaattaaagaagaataa
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