Candidatus Nitrosacidococcus tergens: NSCAC_0791
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Entry
NSCAC_0791 CDS
T06962
Symbol
dnaE
Name
(GenBank) DNA polymerase III alpha subunit
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
ntg
Candidatus Nitrosacidococcus tergens
Pathway
ntg03030
DNA replication
ntg03430
Mismatch repair
ntg03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ntg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
NSCAC_0791 (dnaE)
03430 Mismatch repair
NSCAC_0791 (dnaE)
03440 Homologous recombination
NSCAC_0791 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ntg03032
]
NSCAC_0791 (dnaE)
03400 DNA repair and recombination proteins [BR:
ntg03400
]
NSCAC_0791 (dnaE)
Enzymes [BR:
ntg01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
NSCAC_0791 (dnaE)
DNA replication proteins [BR:
ntg03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
NSCAC_0791 (dnaE)
DNA repair and recombination proteins [BR:
ntg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
NSCAC_0791 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DNA_pol_IIIA_C
P63C
tRNA_anti_2
Motif
Other DBs
NCBI-ProteinID:
CAB1275687
UniProt:
A0A7G1Q947
LinkDB
All DBs
Position
1:795871..799344
Genome browser
AA seq
1157 aa
AA seq
DB search
MSFVHLRLHTEYSMVDGLVRIKPLIQAALRAKMPALAITDQNNIFGIVKFYRSACTAGIK
PIIGADFLLASQEENNHFSRFTLLCQNHVGYQNLSYLLSRAYRERQVQGTPYIQWDWIKD
HNEGLIVLSGGYEGNIGQALLSNNTNKSKQLLANWSKQFPDRFYLELHRTGRENEEQYLH
AAVDLALVSGIPVVATNNVRFLHQDDFEAHEARICIHEGWTLNDPRRTYPCSNQQYFRTP
LEMEALFSDLPEALENTIEIAKRCNLEITLGANYLPDFPIPEEAETTELFLQSEAKNGLI
KRLNQLYPKQEDQRVHQDRYESRLAKELAVIEQMGFAGYFLIVADFIHWAKENKIPVGPG
RGSGAGSLVAYALGITDLDPLAFDLLFERFLNPERVSLPDFDVDFCMERRDKVIDYVSQR
YGQDRVSQIITYGSMAAKAVVRDVGRVLGHPYGFVDQIAKLIPFDPRMTLEKALKESEGL
AARYQTEEEVRFLIDLAKKLEGITRNAGKHAGGIVIAPKKIIEYVPDYCEQGASGGVTQF
DKDDLEAIGLVKFDFLGLRTLTILDWALTAINRQRSAENLPLLDLATLPRDDKKTYSLLK
KCATTAIFQLESRGIKDLIKRLQPDCFEDIIALVALFRPGPLQSGMVDDYINRKHGRAKV
SYFHPDLAPILKPTYGVIVYQEQVMQIAQVLAGYTLGNADLLRRAMGKKKPEEMAKQREI
FITGAKSQNVDEQIATDIFDLMEKFAEYGFNKSHSAAYAFIAYQTAYLKAHYPAPYMAAV
LSSDMDNTEKVVGFIEESKNMGLNILPPNINTSYYYFEAQNQTEIRYGLGAIKGVGKAAL
EGIIKDREQHGVYRDLFDFCSRIDLRKTNRRVLEVLIQAGALDIFGKNRATLEASLTHAL
SLAEQVSYNKAVGQNDLFGLNIISDKKEANSYLEIAPWDQEKQLILEKNALGYYLSGNPI
DSHLSELKEITTATLRNIIGQSYLKRGRQQVVIGGLIESIRISKASQKGRNGFITLNDQS
ARLEVKVFAEVYNSNQKLIQPDQIVVIEGKSGWDSYTDQISVTAEHIYTLDQAREVFAKW
LEINIDGTKLKRESIIELAQILTPFQQQEGCQIRISYHDNQIIVPIILGKQWYIRPTENL
LSNLNLLSEIQYTKVHY
NT seq
3474 nt
NT seq
+upstream
nt +downstream
nt
atgtcttttgtacaccttcgacttcatactgaatactctatggtagatggcttggtacga
attaaaccattaattcaggctgcacttagagcaaaaatgccagcacttgccatcactgat
caaaacaatatatttggaatagtcaaattttatcgatcagcatgtaccgcaggaataaaa
cctattatcggagctgatttcttattagctagccaagaggaaaacaatcactttagtcgc
tttacgctattatgccaaaatcatgtaggttaccaaaacttatcttacttactctctcgt
gcttatcgtgaaaggcaagtacaaggaacaccctatatacaatgggattggataaaagat
cacaatgaagggttaattgtattatctgggggttatgaaggaaatataggtcaagcgtta
ttatcgaataacactaataaaagtaagcaattgcttgcaaattggagtaagcaatttccc
gatcgtttttatttagagctccatcgcactggtagagaaaatgaagagcagtatcttcac
gcagcagtggatcttgctttagtttcaggtattcctgtagtagctactaataatgttcga
tttttgcatcaggatgattttgaagctcacgaagcgaggatctgtattcatgaaggatgg
acactcaatgatcctcgtcgcacatacccctgtagtaatcagcaatactttcgtacacca
ttagagatggaagcgttattttctgatcttccagaagcattggagaatacgatagaaatt
gctaagcgatgtaatcttgagatcactttaggtgcgaactatcttccagattttcctatt
cctgaagaggcggaaactactgaattgtttctccaatctgaggcaaaaaatggcttaata
aagcggcttaatcagctgtatcccaagcaagaagatcagagagtccatcaagatcgctac
gaatctagacttgcaaaggagctggctgtgattgaacagatgggctttgcaggatacttt
ttaatcgttgctgattttattcactgggccaaggaaaataaaattcctgtgggaccaggt
aggggatcaggggcaggatctttagtggcttatgccctaggaattaccgatttggatcct
ttagcctttgatctactttttgagcgatttcttaatccagagcgggtttccttgcctgat
tttgacgttgatttttgtatggaacggcgagataaagttattgattatgtaagtcaacgc
tatggtcaagatcgagtctctcaaatcattacctatggcagtatggcagctaaagcagtg
gtacgggatgttgggagagtgcttggccacccctacggctttgtagatcaaattgcaaaa
ctgattccatttgatccaaggatgactttggaaaaagcattaaaagaatctgaaggactg
gcagctcgttatcaaacagaagaagaagtccgttttcttattgatttagctaagaaacta
gaaggcattactcgcaacgcaggaaagcatgcaggaggaatagtcattgctccaaaaaag
atcattgaatacgtacccgattattgtgaacagggagcaagtggtggggttacccagttt
gataaagatgatctggaagcgattggcttagtaaaatttgactttcttggactacgtacc
ttaacaatccttgattgggcgcttactgctattaatcggcaacgaagtgccgaaaatcta
cctttgctagatcttgctaccttacctagggatgataaaaaaacttatagtttacttaag
aaatgtgcaaccacagctatttttcagttagagtctaggggcattaaggatcttattaaa
aggttacagccagattgttttgaagatattattgcattagtcgcattatttcgcccagga
ccgcttcaatccggaatggttgatgattatattaaccgtaagcatgggcgagcaaaagtc
agttacttccacccagatttagcaccaattcttaaacctacctatggagtcattgtttat
caagaacaagtgatgcagattgcccaagtcttagcaggatatacgctaggtaatgcagat
ttactgcgtcgagcgatgggtaagaaaaaacctgaagaaatggcaaagcagcgagaaatt
tttattactggagcaaaatcacagaatgtagatgaacaaattgcaacagatatttttgat
ttaatggaaaaatttgctgaatatgggtttaataaatcccactcagctgcctatgcattt
attgcatatcaaaccgcttatttaaaagcccattatccagcaccctatatggcagcagtg
ctttcctctgatatggataatacagaaaaagtagttggcttcatagaagagagcaagaat
atgggattaaatattcttccgcctaatattaatactagttattattattttgaagcacaa
aatcaaacagagattcgctacggtttaggagcgattaaaggggtaggcaaagctgcttta
gaaggaattataaaagatagagagcagcatggggtttatagggatttatttgatttttgc
tctcggattgatctcagaaaaacaaaccgacgggtattagaggtattaattcaagcaggt
gctttagatatttttggaaaaaatagagctactttagaagcatctttaacccatgcttta
tcgttagcagaacaagtatcttataataaagctgtcgggcaaaatgatctatttggacta
aatataatttctgataaaaaagaagctaacagctacctagagatagcaccatgggatcaa
gaaaaacaacttattttagagaaaaatgctttaggatattacttaagtggaaatcctata
gatagtcacctttctgaattaaaagaaataactacagctacacttagaaatattattgga
caatcctatttaaagcgaggtcggcaacaagttgtgatcggtggattgatagaatcaatc
cgtattagcaaagcaagtcaaaaagggcgaaatggatttatcaccttaaatgatcaaagt
gctagactagaagtaaaggtatttgctgaagtatataactctaatcaaaaattgatacaa
cctgatcaaattgtggtgattgaaggaaaatctggatgggattcttatacagatcaaatt
tcggttactgcagagcacatttatacgttagatcaggctcgtgaagtatttgcaaagtgg
ttagaaatcaatatagatggtactaaactgaaaagagaatctattatagagttagcacag
atactgactccttttcagcagcaagaaggatgtcaaatccgtatttcttatcatgataac
cagattattgtaccgattattctcggcaagcaatggtatattcgtccaacagagaatcta
ttatctaatctcaatttactttcagaaattcaatatactaaagtgcattattaa
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