Candidatus Nitrosacidococcus tergens: NSCAC_1256
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Entry
NSCAC_1256 CDS
T06962
Symbol
ihfB
Name
(GenBank) Integration host factor subunit beta
KO
K03530
DNA-binding protein HU-beta
Organism
ntg
Candidatus Nitrosacidococcus tergens
Brite
KEGG Orthology (KO) [BR:
ntg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ntg03032
]
NSCAC_1256 (ihfB)
03036 Chromosome and associated proteins [BR:
ntg03036
]
NSCAC_1256 (ihfB)
03400 DNA repair and recombination proteins [BR:
ntg03400
]
NSCAC_1256 (ihfB)
DNA replication proteins [BR:
ntg03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
NSCAC_1256 (ihfB)
Chromosome and associated proteins [BR:
ntg03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
NSCAC_1256 (ihfB)
DNA repair and recombination proteins [BR:
ntg03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
NSCAC_1256 (ihfB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_1
ChapFlgA
HU-DNA_bdg
Motif
Other DBs
NCBI-ProteinID:
CAB1276607
UniProt:
A0A7G1QAD8
LinkDB
All DBs
Position
1:complement(1279388..1279720)
Genome browser
AA seq
110 aa
AA seq
DB search
MKKTILLLSLVILVSTSAHAIGEKELATRIAKQTEIEQNQVESIIAAFKDQIVTSLKEGE
EVRLSSLGKFYAKHMDARKARNPRTGEQIQVPAKSYLRFKAFPSGSDQIN
NT seq
333 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaaaccattttacttttatcgctagtgatcttagtctctacatcagctcatgca
attggagagaaagagctcgcaactcgtatcgcaaagcagacagagattgaacaaaatcaa
gtagagagtattattgctgccttcaaagatcagatcgttactagtctaaaagagggagaa
gaggttcggcttagtagtttaggtaaattttacgctaaacatatggatgcaagaaaagca
agaaatcctagaacaggtgaacagattcaagtacctgctaaaagctatctacgctttaaa
gcttttccttcaggaagtgatcaaataaattga
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