Candidatus Nitrosacidococcus tergens: NSCAC_1582
Help
Entry
NSCAC_1582 CDS
T06962
Symbol
rpoN
Name
(GenBank) RNA polymerase, sigma 54 (sigma N) factor
KO
K03092
RNA polymerase sigma-54 factor
Organism
ntg
Candidatus Nitrosacidococcus tergens
Pathway
ntg02020
Two-component system
ntg02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
ntg00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
NSCAC_1582 (rpoN)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
NSCAC_1582 (rpoN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ntg03021
]
NSCAC_1582 (rpoN)
Transcription machinery [BR:
ntg03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
NSCAC_1582 (rpoN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
HTH_32
Motif
Other DBs
NCBI-ProteinID:
CAB1277263
UniProt:
A0A7G1QBU4
LinkDB
All DBs
Position
1:1609451..1610902
Genome browser
AA seq
483 aa
AA seq
DB search
MKTGLQLRLKQQLALTPQLQQSIRLLQLSSIDLQNEVQQMLESNPLLEQVGHEEEHIVKN
EESKDSTSTLLEENIPEDLSIDANWSDIYDYSLSPKPSKDESPFDIDSIKNTQETLQECL
LWQAYLNTTSEREFFITSKIIDAINEQGYLDSSLKEIIETIETDIVVESEEVQAVLSKVH
NFDPPGIGARDLKECLLLQLNRYPTDTPLLDLTKWLVLRYLPDLAEHNYEKIIREINLLP
IWEELSREKLDSILKMIRSLNPYPGYQVQSNKIEYIIPDVYVTKSNGRWKTELNLEVIPQ
LRINSYYKDLTRKNNNAPATQSYLKNQLQDARWFIKGIHVRNETLLKTATCIVKYQQKFL
EHGNEIDICPLVLHDVAESIAMNKSTVSRITTNKYMNTPWGIFELKYFFSSSIKTENGEG
YSSTAIRAAVKKLIAQEPANKPLSDNAIALVLEKQGIKISRRTVTKYREFLNIPTSSERK
KSS
NT seq
1452 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaccggactccaattacgattaaaacaacagcttgcattaacccctcaattacaa
caatcaatccgtctattgcagctttcttctattgatctccaaaatgaggttcaacagatg
ctggaatctaatccactattagaacaagttggacatgaagaagagcatattgtaaaaaac
gaagaatctaaagattcaacatctactttactagaagagaatatacctgaagatctttcc
atagatgcaaattggagcgatatttatgattactctttatctccaaagccatctaaagat
gagtctccctttgatatagatagtattaaaaacactcaagagacgctacaagaatgccta
ctctggcaagcttatttaaacactacgagtgaaagagaattttttattactagtaaaatt
attgatgcaattaatgaacaaggctatttagatagttcgcttaaagaaataatagaaact
atagaaacagatattgtagttgaatccgaggaagttcaggcagttttgtctaaggtacac
aattttgatcctccaggaattggtgcaagggatttaaaagagtgtcttttattacagctc
aatcgctatccaactgatactccattattagaccttactaagtggcttgttctacgctat
ttgcctgatttagcagaacataactatgaaaaaataattagggaaattaacttattgcca
atatgggaagagctaagtagagaaaaattagattcaatattaaaaatgatccgctctctt
aatccctatccaggctatcaagtacaatctaataaaatagagtatattattcccgatgtt
tatgtcactaagtctaatggtcgctggaaaactgaattaaacctagaggttattcctcag
cttagaattaatagctactataaagatttaacccgcaaaaataataatgcacctgctaca
cagagttatttgaaaaatcaacttcaggatgctcgttggtttattaagggaatacatgtt
cgtaatgaaactttactaaaaactgctacctgtattgttaaatatcaacagaaattttta
gagcatggaaatgaaatagatatatgtccattagtattacacgatgttgcagaatctatt
gctatgaataaatcaacggtatctcgtattactacgaataaatatatgaacaccccttgg
gggatttttgaattaaaatattttttctctagtagtataaaaacagaaaatggagaaggt
tattcctcaactgctatccgtgctgcagttaaaaaattaattgcacaagaaccagcaaat
aaacctctaagcgataatgctattgcactagtattagaaaaacaaggtatcaaaatatct
cgccgtacagtaacaaagtatcgagagtttttgaatattcccacatctagcgaacgaaaa
aaatcttcataa
DBGET
integrated database retrieval system
