Niallia tiangongensis: AB3U99_00710
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Entry
AB3U99_00710 CDS
T10881
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
ntgc Niallia tiangongensis
Pathway
ntgc03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
ntgc00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
AB3U99_00710 (rpoC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ntgc03021
]
AB3U99_00710 (rpoC)
03400 DNA repair and recombination proteins [BR:
ntgc03400
]
AB3U99_00710 (rpoC)
Enzymes [BR:
ntgc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
AB3U99_00710 (rpoC)
Transcription machinery [BR:
ntgc03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
AB3U99_00710 (rpoC)
DNA repair and recombination proteins [BR:
ntgc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
AB3U99_00710 (rpoC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-ProteinID:
XKB97406
LinkDB
All DBs
Position
139383..142982
Genome browser
AA seq
1199 aa
AA seq
DB search
MLDVNNFEYMKIGLASPDKIRSWSFGEVKKPETINYRTLKPEKDGLFCERIFGPTKDWEC
HCGKYKRVRYKGVVCDRCGVEVTRAKVRRERMGHIELAAPVSHIWYFKGIPSRMGLVLDM
SPRALEEVIYFASYVVTDSGDTALEKKQLLSEKEYRAYRDKYGVKFQASMGAEAIKKLLS
DIDLNKDVEALKEELKTAQGQRRTRAIKRLEVLEAFRGSGNEPSWMILDVLPVIPPELRP
MVQLDGGRFATSDLNDLYRRVINRNNRLKRLLDLGAPSIIVQNEKRMLQEAVDALIDNGR
RGRPVTGPGNRPLKSLSHMLKGKQGRFRQNLLGKRVDYSGRSVIVVGPNLKMYQCGLPRE
MAIELFKPFVMKELVEKGIAHNIKSAKRKIERLQPEVWDVLEEVIKEHPVLLNRAPTLHR
LGIQAFEPTLVEGRAIRLHPLVCTAYNADFDGDQMAVHVPLSSEAQAEARLLMLAAQNIL
NPKDGKPVVTPSQDMVLGNYYLTLEREGAVGEGMIFNDTSEAILAYQNGYVHLHTRVAVR
ASSLNNETFTEEQNNQLLLTTVGKLIFNEILPKSFPYINEPTKTNLEEKTPERYFVEPGV
DVPATIRELPILEPFKKKILGNIIAEVFKRFKITETSKMLDRMKDLGFKHSTKAGITVGV
ADIVVLGEKQEIIEEAQGKVDNVMKQFRRGLITEEERYDRVISIWSSAKDIIQAKLMKSL
DKRNPIFMMSDSGARGNASNFTQLAGMRGLMANPAGRIIELPIISSFREGLTVLEYFIST
HGARKGLADTALKTADSGYLTRRLVDVAQDVIVRDDDCGTDRGLLVSALKEGTEIIESLD
ERLIGRYARKAIRHPETKEVLVPENGLITEDLAVEIVEANIEEVWIRSAFTCNTRHGVCK
KCYGRNLATGQEVEVGEAVGIIAAQSIGEPGTQLTMRTFHTGGVAGDDITQGLPRIQEIF
EARNPKGQAVITEMAGIIVGINEGRDRQHEIVVQGELETRTYTAPYTARLKVKIDDVVEQ
GQELTEGSIDPKELIKVKNVTAVQEYLLREVQKVYRMQGVEIGDKHVEVMVRQMLRKIRV
VDAGETDVLPGTLLDIHQFTDANAKALKEGKLPATGRPVLLGITKASLETDSFLSAASFQ
ETTRVLTDAAIKGKRDELLGLKENVIIGKLVPAGTGMPRYRYAEPITVEEQTEESVIVE
NT seq
3600 nt
NT seq
+upstream
nt +downstream
nt
ttgttggatgttaataattttgaatatatgaaaataggtctagcttcaccagacaaaatc
cgttcttggtcatttggtgaagtcaaaaagccagaaacaattaactatcgtactttaaaa
ccggaaaaagatggcttgttctgtgagcgtatttttggtcctacaaaagactgggaatgt
cactgtggtaaatacaagcgtgttagatacaaaggtgtagtttgtgatcggtgtggagta
gaagttactcgtgcaaaagttcgtcgtgagcgaatgggtcatatcgaattagcagctcca
gtttcacatatttggtattttaaaggaatcccaagccgtatgggacttgttttagatatg
tctccacgtgctttggaagaagttatttattttgcttcttacgtagttacagattcaggt
gatactgctcttgagaaaaaacaacttctttcagaaaaagaatatagagcataccgtgac
aaatacggcgtgaaattccaagcttctatgggagctgaagcaatcaaaaaactactatct
gatattgatttaaataaagatgtagaagcattaaaggaagaattaaaaactgcacaaggt
caaagaagaacacgtgcaatcaaaagactagaagtattagaagcattccgtggttctggt
aatgaaccttcttggatgattcttgacgtacttccagtaattcctccagaattacgtcct
atggttcaattagatggtggacgttttgcaacttctgacttaaatgatttatatcgtcgt
gtaattaaccgtaataatcgcttaaaaagattattagacttaggagcaccaagtattatc
gttcaaaacgagaaacgtatgcttcaagaagcggttgacgcactgatcgataacggtcgt
cgtgggcgtccggtaactggtcctggtaacagaccacttaaatcactttctcacatgtta
aaaggtaaacaaggacgtttccgtcaaaacttactaggaaaacgtgttgactattctgga
cgttcggtaatcgttgttggtccgaacttaaagatgtatcagtgtggtctgcctagagaa
atggcaattgaattgtttaagcctttcgtaatgaaagagttagtagaaaaaggtattgct
cataatatcaagtctgcaaaaagaaaaattgaaagacttcaaccagaagtatgggatgtg
cttgaagaagtaattaaagagcatccagtattgcttaaccgtgccccaactctacataga
ttgggaatccaggcatttgaaccaactttagtagaaggccgtgcgattcgccttcatcca
ctagtatgtacagcatacaatgctgactttgatggagaccaaatggcggttcacgttcct
ttatcttctgaggcacaagcggaagcacgtttacttatgcttgcagctcaaaacatcttg
aacccaaaagatggtaaaccggttgttactccttcacaggatatggtattaggaaactac
tacctaacattagaacgtgaaggtgctgttggagagggtatgattttcaatgatacaagc
gaagcaatattggcttaccaaaacggttatgtacatttacacactcgtgtagcagtacgt
gctagctctttaaataatgaaacatttacagaagagcaaaataatcaattgttattaacg
acagttggtaaattaattttcaatgaaattttaccgaaatctttcccatatattaacgaa
ccgactaaaacaaacttagaagaaaaaactcctgaaagatattttgttgagccaggtgta
gatgtgcctgctactatcagagagttgccaattcttgagccgtttaagaagaaaattttg
gggaatataatcgctgaagtatttaaacgattcaagattactgaaacttctaagatgttg
gatagaatgaaagatctaggattcaaacattccacaaaagcgggtattactgttggtgta
gctgatatcgttgtattaggtgaaaagcaagaaattatcgaagaagcgcaaggtaaagtt
gataatgtcatgaaacaatttagacgtgggttaattaccgaggaagaacgttatgatcgc
gtaatttctatctggagctctgcgaaagatataatccaagcgaagctgatgaagtccttg
gataaacgaaatccaatctttatgatgagtgactcaggtgcccgtggtaacgcatctaac
tttacacagcttgctggtatgcgtggtttgatggccaacccagctggtagaatcattgaa
ttgccgattatctcaagtttccgtgaaggattaacagtattagaatactttatttctact
cacggtgctcgtaaaggtcttgccgatacagcactgaaaacagcagattctggttactta
actcgtcgtctagtagatgtagcacaagatgttattgtccgtgatgatgattgtggtaca
gatagaggattattggtttctgctcttaaagaggggacagaaattattgaatccctggat
gagcgtttaattggacgatatgcaagaaaggccattagacatccagaaacgaaggaagta
cttgttcctgaaaatggactgattacagaagatttagctgtggaaattgtagaagctaat
attgaagaagtgtggattcgttctgcatttacatgtaatactcgtcatggagtatgtaaa
aaatgttatggtcgcaacttagcaactggccaagaggtggaagtaggagaagctgttggt
attattgcagcacaatcaatcggggaaccaggtacacagttaacaatgcgtacattccat
acaggtggggttgctggagacgatattacacaaggtttacctcgtattcaggaaatattt
gaagctcgtaatccaaaagggcaagcggttattactgaaatggcagggataattgttggt
atcaatgaaggcagagaccgtcaacatgaaattgttgttcaaggtgaattagaaactaga
acatatactgctccttacacagcaagattgaaagttaagatcgatgatgttgtagaacaa
ggacaggaattaacagagggttctattgatccgaaagaattaattaaagtgaaaaacgtt
acagcagtacaagagtatctacttcgcgaagtacaaaaagtatatcgtatgcaaggggta
gaaattggggataaacacgtagaagtaatggttcgccaaatgttacgtaaaatcagagta
gtggatgctggtgagacggatgtattaccaggtacactattagatattcaccaatttacg
gatgcaaacgcaaaagctttaaaagaaggaaaacttccagcaacaggaagaccagtttta
ctaggaattacgaaagcgtctcttgaaacggattcattcctatccgctgcatcattccaa
gaaactacaagagttcttacagatgctgcgattaaaggaaaacgtgatgaattactagga
ttaaaggagaatgtaattattggtaaattggttccggctggaacaggtatgccaagatat
cgctatgcagagccaattactgtagaagaacaaacagaagagtcggttattgtagagtaa
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