Niallia tiangongensis: AB3U99_02200
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Entry
AB3U99_02200 CDS
T10881
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
ntgc Niallia tiangongensis
Pathway
ntgc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ntgc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AB3U99_02200
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ntgc03019
]
AB3U99_02200
03009 Ribosome biogenesis [BR:
ntgc03009
]
AB3U99_02200
Enzymes [BR:
ntgc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
AB3U99_02200
Messenger RNA biogenesis [BR:
ntgc03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
AB3U99_02200
Ribosome biogenesis [BR:
ntgc03009
]
Prokaryotic type
rRNA helicases
AB3U99_02200
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
AAA_19
BLYB
Motif
Other DBs
NCBI-ProteinID:
XKB97679
LinkDB
All DBs
Position
437858..439324
Genome browser
AA seq
488 aa
AA seq
DB search
MVKFQDLGISPATMKSLKKMGFEEATPIQAETIPLSLQNKDLIGQAQTGTGKTAAFGVPL
VDKVDVAKEVIQGIIIAPTRELAIQVSEELYKIGYGKRARVLSIFGGQDINRQIRALKKN
PHIIVGTPGRILDHINRKTLRLDSVKTVILDEADEMLNMGFIDDIESILSKIPTERQTLL
FSATMPAPIRKMAERFMKDPEVVKVKAKEMTVPLIEQYYIETQEKTKFDILTRLLDIQSP
ELAIIFGRTKRRVDELSEALNLRGYTAEGIHGDLSQAKRMSVLRKFKEGTIDVLVATDVA
ARGLDISGVTHVYNFDIPQDPESYVHRIGRTGRAGKEGVAITFITYRERSYLQVVEKTTK
RKMEKMVPPTVDQAIEGQQKAVIEKISQIIDENNLDSYRNVADELLEQKDASTIVAAVLK
MLTKEPDTTPVKLTEEKPLPSKRDRKPYDKNNDRGGRKNYNPRQPQGYSSNKRQGQSSGG
YNKSKSYR
NT seq
1467 nt
NT seq
+upstream
nt +downstream
nt
ttggtaaagtttcaagatttaggcattagtcctgctacaatgaaatcattaaaaaaaatg
gggtttgaagaagctacacctattcaggcagaaactattccgttaagtcttcaaaataaa
gacttaattggtcaagcgcaaacaggaactgggaaaacagctgcttttggagtgccttta
gtggataaggttgatgttgcaaaggaagtaatccaagggattattattgcaccgacaaga
gagcttgctattcaagtatcagaagaattatacaaaatcggctacggcaaacgtgcaaga
gtcttatctattttcggcggacaggatataaatcgccaaatccgtgcattaaagaaaaat
cctcatattattgttggtactcctggacgtattttagatcatattaatcgtaaaacactt
cgtttggatagtgttaaaacagttatattggatgaagcggatgagatgctgaatatggga
ttcattgatgatattgaatctatcctttcaaaaattccgacagaaagacaaactttatta
ttctcagctactatgccagcaccgattagaaaaatggctgagcgcttcatgaaggatcca
gaagtagtaaaagtgaaagcgaaggaaatgacagtaccattaattgaacagtattatatt
gaaacacaggagaaaacgaaatttgatattctaacaagattattggatattcaatctcct
gagcttgccattatttttggtcgcacaaaacgtcgtgttgatgagctttctgaagcatta
aatctgcgtggctatacagcagaaggaattcatggagatttaagtcaggcaaaacgtatg
tctgtgcttcgcaaatttaaagaaggaaccattgatgtacttgttgcaacagatgtagct
gcacgtggacttgatatttctggtgtaacgcatgtatataatttcgatattcctcaagat
ccagaaagctatgtacaccgtattggccgtactggccgtgctggtaaagaaggtgtcgct
attacgttcattacgtatagagaaagatcttatcttcaagttgtagaaaaaacaacaaag
agaaaaatggaaaagatggttccgccaacagtggatcaagcaatcgaaggtcagcaaaaa
gcagtcatcgaaaaaatttcgcaaattattgatgaaaacaatttagattcttaccgaaat
gtagcagatgagttattagagcaaaaagatgcgtctacaatcgtagcggcagtcctaaaa
atgctcacgaaagaaccggatacaacacctgttaagttaacagaagagaagccattaccg
tcgaaacgtgaccgcaagccatatgataaaaataatgatcgtggtggcagaaaaaattat
aatccacgccaacctcaaggttatagcagtaacaaacgtcaaggtcaatcaagtggcgga
tacaataaatctaagtcttatcgttaa
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