Niallia tiangongensis: AB3U99_03675
Help
Entry
AB3U99_03675 CDS
T10881
Symbol
rlmD
Name
(GenBank) 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
ntgc Niallia tiangongensis
Brite
KEGG Orthology (KO) [BR:
ntgc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ntgc03009
]
AB3U99_03675 (rlmD)
Enzymes [BR:
ntgc01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
AB3U99_03675 (rlmD)
Ribosome biogenesis [BR:
ntgc03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
AB3U99_03675 (rlmD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
TRAM
Methyltransf_31
Cons_hypoth95
Methyltransf_25
MTS
Methyltransf_15
TehB
PrmA
UPF0020
Methyltransf_11
Methyltransf_32
Ubie_methyltran
PabTrmU54_TRAM_dom
Motif
Other DBs
NCBI-ProteinID:
XKB97929
LinkDB
All DBs
Position
743231..744631
Genome browser
AA seq
466 aa
AA seq
DB search
MKDKQQNTVAKLKVGQTFPLTIKRLGINGEGVGYFKRQVVFVPGALPGEEVVVEATKVQP
KFSEGKVKKIRKSSPFRVQAPCPIYEQCGGCQLQHLAYDQQLQEKRDIVIQSLERHTKLK
IDKLDIRPTIGMEDPWNYRNKSQFQVGQQKNGAIIAGLYGLDSHRLIPIQNCMVQHPLTN
KVSEEVRKILEEFQIPIYDERKQKGIVRTIVTRAGFNSGEVQVVLITTQKEMPRKKLVMA
EIQKRLPEVKSLVQNINGNKTSLIFGEKTIHLSGEEVIQETLGDLNFELSARAFFQLNPV
QTVKLYDEVKKAAALTGKEKIVDAYCGVGTIGLWLADGASEVRGMDTIEAAITDAQKNAD
KHGIENATYVTGTAEHWLPKWVEEGWRPDVVVVDPPRTGCDRKLLDAIKKVKPKKFVYVS
CNPSTLAKDIDYLSKDYKVEYLQPVDMFPHTAHVECISQLILKEGN
NT seq
1401 nt
NT seq
+upstream
nt +downstream
nt
atgaaagataaacagcaaaatacggtggcaaagttgaaggtaggacaaacctttccatta
acaatcaagcgattagggataaatggcgaaggagtcggctattttaaaagacaggttgta
ttcgtgccaggtgctcttcctggagaagaagtagtagtagaggcaacaaaggttcagcct
aagttttcggaaggaaaggtaaagaagataagaaaatcttccccctttcgcgtacaggca
ccatgtcccatttacgagcaatgcggtggatgtcagcttcagcatttagcctatgaccag
cagctacaggaaaaaagagatatcgttatccaatcattagaacgtcatacaaagctgaaa
atcgataaattagatattcgcccaacaatcggaatggaagatccatggaactatcgcaat
aagagccaattccaagtgggacagcaaaaaaatggtgcaatcattgcaggtctatacgga
cttgattcccatcgcctaatcccaattcagaattgcatggtacaacatccgttaacgaac
aaggtatcagaagaagttcgcaaaatcttagaagaattccaaatcccaatctatgatgaa
cgaaaacaaaaagggatcgtccgcacgattgtaactagagcaggatttaattcaggcgaa
gttcaagtcgtacttatcacgacacaaaaagaaatgccaagaaaaaaactagtaatggct
gaaatccaaaaaagattaccagaagtgaaatcattagtacaaaacataaacggtaacaaa
acctcgcttatttttggagaaaaaacaatccacttaagtggggaagaagtaatccaagaa
acattaggagatttaaatttcgaactatcagcacgtgccttttttcaattgaatcctgtg
caaacagtaaagctgtacgatgaagtgaaaaaagcagctgccttaactggcaaagaaaaa
attgtagatgcctattgtggggttggaacaattggtttatggctagcagatggcgcaagc
gaagtccgagggatggatacgatcgaagcagcaattacagatgcgcaaaaaaatgcagat
aaacacggtatcgaaaacgcaacctatgtaacaggaacagcagaacactggctgccgaag
tgggtagaagaggggtggcgtcctgatgtggttgtagtcgatccaccgagaacaggctgt
gatcgtaagttattagatgcgattaaaaaggttaaaccgaagaagtttgtgtatgtttct
tgtaatccatctacgttggcgaaggatattgattatttgtctaaggattataaggtggag
tatttgcagccggtggatatgtttccgcatacggcgcacgtcgaatgtatctcgcaactc
attttaaaagaaggcaactaa
DBGET
integrated database retrieval system
