Niallia tiangongensis: AB3U99_09830
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Entry
AB3U99_09830 CDS
T10881
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
ntgc Niallia tiangongensis
Brite
KEGG Orthology (KO) [BR:
ntgc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ntgc03032
]
AB3U99_09830 (topA)
03400 DNA repair and recombination proteins [BR:
ntgc03400
]
AB3U99_09830 (topA)
Enzymes [BR:
ntgc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
AB3U99_09830 (topA)
DNA replication proteins [BR:
ntgc03032
]
Prokaryotic type
DNA Topoisomerases
AB3U99_09830 (topA)
DNA repair and recombination proteins [BR:
ntgc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
AB3U99_09830 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
Zn_ribbon_RPB9
Toprim_4
Auto_anti-p27
Toprim_3
Toprim_2
Motif
Other DBs
NCBI-ProteinID:
XKB99047
LinkDB
All DBs
Position
2115042..2117117
Genome browser
AA seq
691 aa
AA seq
DB search
MSDFLVIVESPAKAKTIERYLGKKYKVKASMGHIRDLPKSQMGVDIEKQFEPKYITIRGK
GPILKDLKTAAKKAKKIYLAADPDREGEAIAWHLANSLNVDIESDCRVVFNEITKDAIKE
SFKHPRAINMDLVDSQQARRVLDRLVGYNISPLLWKKVKKGLSAGRVQSVAVRLIIEREQ
EIKAFEPEEYWSIEGSFIKGKNNFEASFYGVNGEKIELHSEEDVKKITSQLKDNKFTVDK
VSKKERKRNPAVPFTTSSLQQEAARKLNFRAKKTMMLAQQLYEGIDLGKEGTVGLITYMR
TDSTRISEVAQGEAFEYINSQYGKEYTREDKKKEKKNGKVQDAHEAVRPTSIIREPNKVK
EFLSRDQFRLYKLIWERFIASQMASAVMDTMSVDLSNGNVIFRANGSKIKFPGFMKVYVE
GTDDNVDEKDRQLPDLKEGDTVLNKDIDTKQHFTQPPPRYTEARLVRTLEELGIGRPSTF
APTLDTIQKRGYVALENKRFIPTELGEIVLELILEFFPEILNIEFTANMEQDLDNIEAGK
VDWVKVIDEFYQTFEKRLEVAEQEMQTIEIKDEPAGEDCEECGNPMVYKMGRYGKFMACS
NFPDCRNTKAIVKDIGVKCPKCHEGNIIERKSKKRRIFYGCDRFPECDFISWDKPLQRPC
PKCESMLVEKKLKKGVQVQCVNCDYKEEPQS
NT seq
2076 nt
NT seq
+upstream
nt +downstream
nt
atgtcagattttttagtaatcgttgagtcaccagcaaaagcaaagacaatagaacgatat
ttaggaaaaaaatataaagtgaaagcatcaatgggacatattagggatttacctaaaagt
caaatgggtgttgatatagaaaaacaatttgagccaaagtacataacaatccgcggtaaa
ggtcctattttaaaggatctaaaaactgcagcaaaaaaagcgaagaaaatctatttagca
gctgacccggatcgcgaaggggaagcaattgcatggcacttagctaatagcttaaatgtg
gacatagaatcagattgccgtgttgttttcaatgaaatcacaaaagatgctattaaagag
tcatttaagcaccctagagcgattaatatggacttagtggattcacagcaggctagaagg
gttttagaccgtttagttggatataatatcagtcctctattatggaaaaaagtaaaaaaa
ggactaagtgcaggaagagtgcaatctgttgctgtacgtcttattattgaaagagaacaa
gaaatcaaagcattcgagccagaggaatactggtctattgaaggtagctttattaaaggg
aaaaataattttgaagcatccttttatggagtaaatggagagaaaatcgaacttcattca
gaagaagatgttaagaaaataactagtcagctaaaagataataaatttacagtagataaa
gtcagtaaaaaagaacggaagagaaatcccgctgttccatttactacatcttctctacaa
caagaagcagctcgtaaattaaatttccgtgccaagaaaacaatgatgcttgcgcaacaa
ttatatgaaggaattgatcttggtaaagaaggaacagttggtttaattacctatatgaga
accgattcaactagaatttcagaggttgctcaaggggaagcttttgaatatataaacagt
caatacggcaaggagtatacgagagaagacaagaaaaaagagaagaagaatggaaaagtg
caagatgcccacgaagcagttcgtccaactagcattatccgtgagcccaataaggtaaag
gaatttttatctcgtgatcaatttcgcttatataaattaatttgggaaagatttattgct
agccaaatggcatcagcggtaatggatacaatgagtgtagatttatcaaacggtaacgta
attttccgtgcaaacggctcaaaaataaaattccctggttttatgaaagtatatgtagaa
ggtacagatgataatgttgatgagaaagaccgtcagcttccagatttaaaggaaggggac
acagtattaaataaagatattgacacaaagcagcatttcacacagccgcctccacgctat
acagaagcgaggctagtaagaacactcgaggaattagggataggaagaccatcaaccttt
gctccaacccttgataccattcaaaagcgcggctatgtagcgcttgagaataaacgattt
atcccaactgaattaggggaaatcgtcttagaattaattttggaatttttcccagaaata
ttaaacattgaatttactgccaatatggaacaagatttagataatatagaggcagggaaa
gtcgattgggtaaaggtaattgatgaattctatcaaacgtttgagaaaagattagaagta
gctgaacaagaaatgcagaccattgaaataaaagatgaaccagcaggagaggattgcgaa
gagtgcggcaatccaatggtttataaaatgggtcgatatggaaaattcatggcttgcagt
aatttccctgactgcagaaatacgaaagcgattgtgaaggatattggggtaaaatgtccg
aagtgccatgaagggaatataattgaaagaaaaagtaagaagcgcagaattttttacggt
tgcgatcgttttccagaatgtgattttatttcatgggataagccgctacaaagaccttgt
ccgaaatgcgaaagcatgttagtagagaaaaaattgaaaaaaggtgtgcaagtacagtgc
gtaaactgtgattacaaagaagagccacaaagctaa
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