Niallia tiangongensis: AB3U99_12210
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Entry
AB3U99_12210 CDS
T10881
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
ntgc Niallia tiangongensis
Pathway
ntgc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ntgc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AB3U99_12210 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ntgc03019
]
AB3U99_12210 (recQ)
03400 DNA repair and recombination proteins [BR:
ntgc03400
]
AB3U99_12210 (recQ)
Enzymes [BR:
ntgc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
AB3U99_12210 (recQ)
Messenger RNA biogenesis [BR:
ntgc03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
AB3U99_12210 (recQ)
DNA repair and recombination proteins [BR:
ntgc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
AB3U99_12210 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
HTH_40
DEAD
Helicase_C
HRDC
RecQ_Zn_bind
ResIII
Helicase_Sgs1
Sigma70_r4_2
DUF6115
GerE
Motif
Other DBs
NCBI-ProteinID:
XKB99603
LinkDB
All DBs
Position
2559399..2561552
Genome browser
AA seq
717 aa
AA seq
DB search
MMNKARSILKEYFGYEDFRKGQAEIIQLLLNKENVVGIMPTGGGKSICYQVPAMLFPGLT
VVISPLISLMKDQVDALTEVGIPATFINSTLHNEEVQERVFDIKNGHYKLLYIAPERLEA
DYFMDILKEVTISFIAVDEAHCISQWGHDFRPSYAKIGYMINKLPEIPLVAALTATATPK
VHEDICQLLNIPWENTVKTGFARDNLSFSIIKGQDKGKFLESFLKKNKEESGIIYAATRQ
EVEKLYDRLSKKGYSVSKYHGGMSDFQREAEQQAFIKDDISIMIATNAFGMGIDKSNIRY
VIHYQLPKNMEGYYQEAGRAGRDGLPSKCILLYSAQDIRIQRFLIDQTIPDPDKQKQDID
KLQSMINFCHTEDCLQEYILHYFGEEHTEKCGQCSNCTDERNVIDVTVDAQKVLSCMIRM
GERFGKTMIAQVLTGSKNKKLMDFHLDRIKTYGLMKEQSAKEISDFIEFLISEQYIDVSS
GAMPILKVSKKGKEVLLGKLAVERKEQVVTVKVSENNALFEYLRRIRKQLAEAENVPPFV
VFSDQTLRNISITMPVTQDEFSEIKGIGDHKLQKYGDIMIEHIIKFKNDYPDFSNAAKRD
NTVSTKREKQTKKSVENSHLVTLDLWKSGLSLKEIAKERELNLQTVENHLLRCGEEELEV
DWTQFLKPEDQMKIVDVIRKIGMEKLKPIKEELPEEISYFMIKVAIMLENRKRKILH
NT seq
2154 nt
NT seq
+upstream
nt +downstream
nt
atgatgaacaaagcccgtagtattttaaaagaatactttggatatgaagattttagaaaa
ggacaggctgaaattattcagcttttattaaataaggagaatgttgtagggataatgcca
actggtggaggaaaatccatttgttatcaagtacctgcaatgcttttcccaggattaacg
gttgttatttcaccattgatttcattaatgaaggatcaagtagatgcattaaccgaagtg
ggtattccagctactttcatcaatagtacgttacataatgaagaagtgcaggaaagagtt
tttgatatcaaaaatggacattataaattactttatattgcaccggaacgactagaagca
gattattttatggatattttgaaggaagttaccatttcatttattgcagtggatgaagct
cattgtatttcacaatggggtcatgattttcgaccaagctatgcaaaaattggctacatg
atcaataaattacctgaaattccacttgttgcagcgttaacagcgacggcaacccctaaa
gttcatgaggatatatgccaattattaaatataccttgggaaaatactgttaagacagga
tttgctcgtgataatctatccttttctatcataaaaggtcaggacaaaggaaaatttctt
gaatcctttctaaagaaaaataaagaggagtcaggcattatttatgcagcaacaagacaa
gaggtagaaaagctctatgatcgcctatcgaaaaagggatattctgtttcgaaatatcat
ggagggatgagtgattttcaaagggaagctgagcagcaagcatttataaaagatgatata
tcgattatgattgcgacaaatgcttttggtatgggaattgataaaagtaatattagatat
gttattcattatcagcttccaaaaaacatggagggctattatcaagaagcgggaagagca
gggcgtgacggattgccgagtaagtgcatattgttatattctgcacaggatattcgcatt
cagcgattcttaattgatcagacgatacctgatccggataaacaaaagcaagacattgat
aaactacaatctatgattaatttttgtcatacggaagattgcttgcaagaatatatttta
cattattttggggaagaacatacggaaaagtgtggccaatgctccaactgtacggatgaa
cgaaatgtaattgatgtaacagtcgatgctcagaaggtactgtcttgcatgattagaatg
ggagagcgatttggaaaaacgatgattgctcaagtattgactggttccaaaaacaagaaa
ttaatggattttcatttagatcgtattaaaacctatggcctgatgaaagagcaatcagca
aaggaaattagtgattttattgaatttttaatttctgaacaatatattgatgtaagttct
ggtgcgatgccaatattaaaagtttccaaaaagggaaaagaagttcttctcggtaaatta
gcagtcgaacgaaaagaacaagtcgtgacggtgaaagtatctgaaaataacgctttattc
gagtatctgagacgtattagaaaacagctggcagaagcagaaaatgttcctccttttgtt
gttttttccgatcaaacgttaagaaatatctccattacaatgcctgtaacacaggatgag
tttagcgaaataaaaggaattggtgatcataaactgcaaaaatatggagatatcatgata
gaacatatcatcaagttcaaaaacgactatcctgatttctctaatgcagcaaaacgcgat
aatacagtgtcaacgaaaagggaaaaacaaacaaaaaaaagcgtggaaaactcccattta
gtaacgttagatttatggaaaagtggattatcattaaaggaaattgcgaaagaaagagaa
ttaaatctgcaaacagtagaaaatcatttactacgatgtggagaagaagagctggaggtt
gattggactcaatttcttaagccagaagatcaaatgaagattgtagatgttattcgaaaa
ataggcatggaaaaactaaaaccgattaaagaagaactcccagaagagattagctatttt
atgattaaagttgccataatgctagaaaatcgaaagcgaaagattttacattaa
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