Niallia tiangongensis: AB3U99_12470
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Entry
AB3U99_12470 CDS
T10881
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
ntgc Niallia tiangongensis
Pathway
ntgc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ntgc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AB3U99_12470
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ntgc03019
]
AB3U99_12470
03009 Ribosome biogenesis [BR:
ntgc03009
]
AB3U99_12470
Enzymes [BR:
ntgc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
AB3U99_12470
Messenger RNA biogenesis [BR:
ntgc03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
AB3U99_12470
Ribosome biogenesis [BR:
ntgc03009
]
Prokaryotic type
rRNA helicases
AB3U99_12470
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
AAA_25
Motif
Other DBs
NCBI-ProteinID:
XKB95074
LinkDB
All DBs
Position
2617165..2618499
Genome browser
AA seq
444 aa
AA seq
DB search
MQSFTEIGLSTAIIDKLNKQGIKQPTPIQTKVIPPLLKGGDIIAQAQTGTGKTFAFVLPI
LEKMDTDTNHVQTLILTPTRELAIQITDEIMKMKQAAVKVLAVYGGQDVDKQLKVLQRDV
SIVVATPGRLIDHIKRGTIDLSKISYFVLDEADQMLHIGFLDEISYIMRHIPKSRQTMLF
SATISKEVEKLAKKYTKNGEYFTVEAKQGPAKTVKQVSIHTTDRAKQGTLMTLVKEANPY
MAVIFCRTKRRVTKLYEVLLANKFSCGQLHGDLSQTKREQVMKAFRDGKFQLLIATDVAA
RGLDIDGITHVYNYDIPQDAESYVHRIGRTGRAGSEGYAVTFYSSDDRPLLDTIEEQLDI
KIEKIQQPKKTEKNKKDIETKPSVKNDKKQASPRNNRETHRSSTSDKQSNESKRKRFSDS
SKKSSTFQSPAKKRTKPKKRTGKR
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
atgcaatcatttacagaaatcggtttatctacagcaatcatcgacaagctcaataaacaa
ggaattaaacagccaacccctattcaaacaaaggtcattccaccactccttaaaggaggc
gatataattgcccaagcacaaacagggacaggaaaaacatttgcttttgtattgccgatt
ttagaaaaaatggatacagatacaaatcacgttcaaacgctaatcttaacgccaacaaga
gaacttgccattcaaataaccgatgaaatcatgaaaatgaaacaagcggcagtaaaggtt
ctagctgtttacggagggcaggatgtggataagcaattgaaagtcttacaaagagacgta
tcaattgtagtagctacaccaggcagattaattgatcatatcaaacgaggaacaattgat
ttaagtaaaatctcttattttgtattagatgaagcagatcaaatgcttcatattggattt
ttagatgagattagctatattatgagacatatccctaagtcgagacaaacaatgttattt
tctgcgaccatttcaaaggaagtggaaaagcttgcgaaaaaatatacaaaaaatggagaa
tattttacagtggaagcaaaacaaggccctgcaaaaactgttaagcaagtaagtatacat
acaaccgatcgtgccaagcaaggtacgttaatgaccttagttaaggaagcaaatccttat
atggccgtcattttttgccgaacaaagcgtcgcgtgacaaaattatatgaagtattgctc
gcaaataaatttagctgtggccaattgcatggtgatttgtcgcaaacaaaaagagagcaa
gtaatgaaagcatttcgggatgggaaatttcaattattgattgctacagatgttgcggca
agaggattggacattgatggaattacccatgtttataattatgatattccacaggatgca
gaaagctatgtgcatcgaatcggcagaacgggaagagctggatcagaaggatatgcagta
accttttattcctctgatgatagacccctgttagataccattgaggaacaattggatatt
aaaattgaaaaaatacagcagccaaaaaagaccgaaaaaaataaaaaagatatagaaacg
aaaccatctgtaaagaatgacaaaaaacaagcttctcctagaaataatagagagacgcac
cgttcatctacatctgataaacaaagtaatgaaagcaagcgcaaacgtttttcagacagc
agtaagaagtcaagtacattccaatcacctgcaaaaaaacggacaaaaccaaagaagaga
acaggaaaaagataa
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