Natranaerobius thermophilus: Nther_0902
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Entry
Nther_0902 CDS
T00761
Name
(GenBank) DEAD/DEAH box helicase domain protein
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
nth
Natranaerobius thermophilus
Pathway
nth03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
nth00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Nther_0902
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nth03019
]
Nther_0902
03009 Ribosome biogenesis [BR:
nth03009
]
Nther_0902
Enzymes [BR:
nth01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
Nther_0902
Messenger RNA biogenesis [BR:
nth03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
Nther_0902
Ribosome biogenesis [BR:
nth03009
]
Prokaryotic type
rRNA helicases
Nther_0902
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
Cas3-like_C_2
CMS1
Motif
Other DBs
NCBI-ProteinID:
ACB84487
UniProt:
B2A8C1
LinkDB
All DBs
Position
complement(952583..954007)
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AA seq
474 aa
AA seq
DB search
MTTFNDLGLNDGVIKAISEMGFEETTPIQRQAIPQVMNGQDIIGQAQTGTGKTAAFGIPY
IERIQDPNNKEIKGLVVTPTRELAIQVAEEINRLGQYNGITALPIYGGQSIGHQIKALKK
RPQIIVGTPGRLIDHLNRKTIKLNNVNMVTLDEADEMLNMGFIEDIKTILQKTPSHKQTL
MFSATMPGPIKSLAEQFMNDPEIIRTKTKEITVPSIEQQYVEVKEGDKFDVFCRLVDSQS
PEKAIVFGRTKRRVDELYQALKKRGYFAEGIHGDMPQTKRDHVIKNFRTGATELLVATDV
ASRGLDVTGISHIYNFDIPQDADSYVHRIGRTGRAGQSGAAVTLVTPREKGHLNLIEQSI
KRQIPRRPKPSVDEALEGKQKIAVEKLLSEAKDKNARQYHKLAEELLEENDSIELVAGAL
KSLTVESEGPNIKLTEEAPIVRGKSKSKKGSGKSGSGKRQGHKRSHKNYRKKGR
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
atgactacttttaatgatttaggacttaacgacggtgttataaaggccatatcagaaatg
ggctttgaagaaaccacaccaatccaaagacaggctattccacaagtaatgaatggtcaa
gatattattggccaggctcaaactgggacggggaaaacagccgcctttgggattccatat
attgaaaggattcaagaccctaataataaagaaatcaaagggcttgtagtaactcccact
agagagttggctatacaggtggcagaagagattaatagattaggtcagtataatggaatc
accgctttacctatttatggaggccaaagtatagggcaccaaatcaaggctctcaaaaaa
cggcctcaaataatagtcggaacaccaggtcgtttaatcgatcacctaaatcgaaagaca
atcaaattaaacaatgtgaatatggttacattagacgaagccgatgaaatgttgaatatg
ggttttattgaagatatcaaaactatattacaaaaaaccccaagtcacaagcagactctt
atgttttcagccaccatgccgggaccgatcaaaagtttagccgaacaatttatgaatgac
cccgaaataattagaacaaaaacaaaagaaattaccgtgccaagtattgaacaacagtat
gtcgaggttaaagaaggagataaattcgatgttttttgtcgcttagtagacagtcagtct
cctgaaaaagctattgtattcggaagaactaaacgaagagttgatgaactttatcaggcc
ttgaaaaaacgaggttattttgctgaggggattcatggcgatatgccccaaacaaaacga
gaccatgttatcaaaaatttccgtactggagctacagaactccttgtagcaacagacgta
gcttctagagggttagatgttactggaatcagtcatatttataactttgatattcctcaa
gatgctgacagttacgtccatcgtattggcagaactggccgagcaggacaaagcggtgca
gctgtcactttagtaacacctagagaaaaaggacatttaaatctaattgaacaaagtatt
aagaggcaaatccctcgcagaccaaaaccctcggtagacgaagctctagaaggtaaacaa
aaaatagccgtagaaaaactattaagcgaagcaaaagataagaatgctagacaataccat
aaattagcagaagaattattagaagaaaatgactcaattgaactagtagctggtgcttta
aaaagtttaacagtagaaagtgaaggaccaaatatcaaacttaccgaagaggctccgatc
gttagaggaaaatccaaatcaaaaaagggttctggtaagtcaggttcaggtaagcgccag
ggacacaagagaagccataaaaattatcgtaaaaaaggaagataa
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