Natranaerobius thermophilus: Nther_1962
Help
Entry
Nther_1962 CDS
T00761
Name
(GenBank) 2'-5' RNA ligase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
nth
Natranaerobius thermophilus
Brite
KEGG Orthology (KO) [BR:
nth00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
nth03016
]
Nther_1962
Enzymes [BR:
nth01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
Nther_1962
Transfer RNA biogenesis [BR:
nth03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
Nther_1962
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
AKAP7_NLS
SH3_14
Motif
Other DBs
NCBI-ProteinID:
ACB85532
UniProt:
B2A6J9
LinkDB
All DBs
Position
complement(2070390..2070950)
Genome browser
AA seq
186 aa
AA seq
DB search
MRSFIAIFFNSKVVESLARNQNLCREKGIKGKYVKPDNIHLTVKFLGDVEQNALDKLQLL
DQELEQIEPLKLRLSHLGVFPGKGRPRVLWQGLSGDDIKDLQQIHQEVEQFTERELKIAQ
EKKKFRPHVTLLRNPDIPKGVSIDQISKEELERPEILVDSISLIKSELTPKGPIYTELKR
FVFNNS
NT seq
561 nt
NT seq
+upstream
nt +downstream
nt
atgcgtagttttatagcaattttttttaattcaaaagtggtagaaagccttgctagaaat
caaaacttatgtagagaaaaagggattaaaggtaaatacgtaaaacctgataatatacat
ttgacagtcaaatttttaggtgatgttgaacaaaatgctttggataaattacaactttta
gatcaagaactagaacaaatagagcctttaaagttgcgtttatcccatttgggtgtattt
cccggtaaagggcgaccacgagtattgtggcagggattatcaggggatgacataaaggat
cttcaacaaattcatcaggaggtggaacaatttactgaaagagaattaaagatagctcaa
gaaaaaaagaaatttcggcctcatgtcactttgttaagaaatccagatattccaaaaggt
gtttccattgatcaaatttctaaagaagaattagagcggccagaaattcttgtagattct
atttcattgattaaaagcgaattaacaccaaaagggcctatatatacagaactaaaacgt
tttgtgttcaataactcttag
DBGET
integrated database retrieval system
