Nitrospira tepida: DNFV4_00304
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Entry
DNFV4_00304 CDS
T09383
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
nti
Nitrospira tepida
Pathway
nti00260
Glycine, serine and threonine metabolism
nti00460
Cyanoamino acid metabolism
nti00630
Glyoxylate and dicarboxylate metabolism
nti00670
One carbon pool by folate
nti00680
Methane metabolism
nti01100
Metabolic pathways
nti01110
Biosynthesis of secondary metabolites
nti01120
Microbial metabolism in diverse environments
nti01200
Carbon metabolism
nti01230
Biosynthesis of amino acids
nti01240
Biosynthesis of cofactors
nti04981
Folate transport and metabolism
Module
nti_M00140
C1-unit interconversion, prokaryotes
Brite
KEGG Orthology (KO) [BR:
nti00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
DNFV4_00304
09102 Energy metabolism
00680 Methane metabolism
DNFV4_00304
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
DNFV4_00304
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
DNFV4_00304
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
DNFV4_00304
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
DNFV4_00304
Enzymes [BR:
nti01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
DNFV4_00304
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Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
Cys_Met_Meta_PP
OKR_DC_1
Motif
Other DBs
NCBI-ProteinID:
CAI4029885
UniProt:
A0AA86T148
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All DBs
Position
NsDNF:complement(295824..297086)
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AA seq
420 aa
AA seq
DB search
MSDAIGTLEALKATDLDVYEAIQAEEQRQREKLLLIASENFASPAVLAAQGCLMTNKYAE
GYPGKRYYGGCQHVDAVETLAIERAKQIFGAEHVNVQPHSGSQANMAAYLAVLKPGDAIL
GMDLAQGGHLTHGSKVNFSGILFQAFSYGVDRDTEQIDYDVVQKRAEECRPKMIVVGASA
YSRIIDFPRFQQIAKSVGAYLMVDIAHIAGLIAAGLHPNPVPYADFVTTTTHKTLRGPRA
GMILCKAEHAKAIDKIVFPGLQGGPLMHVIAAKAVALKEALSPSFKAYQQQVIANAKALA
EGLLARGYKVVSGGTDNHLMLVNLTNKGVTGKEAEAALDAAGIIVNKNAVPYDEKPPATA
SGIRLGTPTVSTRGMRESDMRQIVDFIDRVIQRPQDQALQQQIRAEAKSLCTKFPIFHQY
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atgagcgatgcgataggaactttggaggcgttgaaagccaccgatctcgacgtctatgag
gcgattcaggcggaggagcagcgccagcgcgagaagctcctgctgatcgcgtcggaaaac
ttcgccagccccgccgtgctggccgcccaaggctgcttgatgacgaacaagtatgccgaa
ggctatccgggcaagcgctactatggcggttgccagcacgtggatgcggtggaaaccttg
gcgatcgagcgagccaagcagattttcggcgcggagcacgtcaacgtgcagccgcattcc
ggctcgcaggccaacatggcggcctatctcgcggtcctcaagccgggggatgccatcctc
gggatggacctcgcgcaaggcggccacctgacccacggcagcaaggtgaacttctccggc
atcctgttccaggccttctcctacggcgtcgaccgcgacaccgaacagatcgattacgac
gtggtccagaagcgggcggaggaatgccgccccaagatgatcgtggtgggggccagcgcc
tattcgcgaatcattgattttccgcggttccagcagatcgccaagtccgtcggcgcctac
ctgatggtggacattgctcacatcgccggcctgatcgcggcgggactccatccgaacccc
gtgccctacgccgatttcgtgacgaccaccacccacaagaccctgcgcggcccgagggcc
ggcatgatcctgtgcaaggccgagcatgccaaggcgatcgacaagatcgtctttccggga
ctccaaggcggcccgttgatgcacgtgatcgccgccaaggccgtggccctcaaggaagcg
ctgtccccatctttcaaggcctatcagcagcaggtgatcgccaacgccaaggcgctcgcg
gagggcttgctcgcccgcggctataaggtcgtgtcgggtgggaccgacaaccatttgatg
ctggtgaatctgaccaacaagggcgtgaccggcaaggaggccgaagcggccctggatgcc
gccggcatcatcgtcaacaagaacgccgtgccctatgacgaaaagccgccggccacggcg
agcggcatccgcctcgggacgccgacggtctcgaccaggggcatgcgggaatccgacatg
cgccagatcgtggacttcatcgatcgcgtgatccaacggccgcaggaccaggccctgcag
cagcagattcgcgcggaggccaaatcgctctgcacgaagtttccgatcttccatcagtat
tga
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