Nitrospira tepida: DNFV4_00461
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Entry
DNFV4_00461 CDS
T09383
Name
(GenBank) Ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
nti
Nitrospira tepida
Brite
KEGG Orthology (KO) [BR:
nti00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
nti03009
]
DNFV4_00461
Enzymes [BR:
nti01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
DNFV4_00461
Ribosome biogenesis [BR:
nti03009
]
Prokaryotic type
ribosomal protein modification factors
DNFV4_00461
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM_2
TRAM
CLP1_P
Motif
Other DBs
NCBI-ProteinID:
CAI4030037
UniProt:
A0AA86T478
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All DBs
Position
NsDNF:434239..435795
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AA seq
518 aa
AA seq
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MKHEPRTSSPRSSLSPMPGERIREKGTKIGFVNLGCSKNQVDSEIMLGQLVAGGFELTSR
PEQAEVVIINTCGFIEEAKQESINTILEHAELKKTGACRVLIAAGCLAQRYQGDLLQELP
ELDGIVGTGEFGKIADITRSLLQPKQPAQRSWISPPPFLYDAMAPRIRLGRAHSAYVKIA
EGCNRHCTFCAIPIMRGRQRSRSIESIVAEAERLAEEGVQELNLISQDTINYGVDLGLRQ
GLTLLLRELVKVKDMRWIRPFYLYPQQVTDELLDLYAGEEKITKYIDMPLQHINDAMLIR
MRRLGDKAFLTKLVERIRSRIPGVTFRTAFIVGFPGETEAMFDELAQFMEEAAFDRVAVF
GYSDEEETPACDLHGKIDQSVIEERRSELLNRQETIALRQSLGKVGSTLSVLVDGLSEDN
EFLLEGRHEGQAPEIDGVVYLSESDVEPGEFVQVKITEATAYDLVGQAIEPVRTRSKAGL
QTRPGPSAPQARRAPSAPQMRRESSVVPLIMPTKVRAQ
NT seq
1557 nt
NT seq
+upstream
nt +downstream
nt
atgaaacacgaaccgcggacatcctcccctcgctcatccctctcccctatgcctggggag
cggatcagagagaagggaaccaagatcggcttcgtcaatctggggtgctccaagaaccag
gtggactccgagatcatgctcggccagcttgtggccggcggcttcgagctgacgagccgt
cccgaacaggccgaggtggtgatcatcaacacctgcggtttcatcgaggaggccaagcag
gaatccatcaacacgatcctggaacatgcggagctgaaaaagacgggggcctgccgggtg
ctgatcgcggccggctgtctcgcgcagcgctaccagggcgacctattgcaggagttgccg
gagctggacgggatcgtgggcaccggcgagttcggcaagatcgcggacatcacccgctcg
ctgcttcagcccaaacaaccggcgcagcggtcctggatcagcccgcccccgtttctttac
gacgcgatggccccgcgcatccggctgggccgtgctcactccgcctacgtgaagatcgcc
gaaggctgcaaccgccactgcacgttttgcgcgatcccgatcatgcgcggcaggcagcgc
agccggtccatcgagtcgatcgtcgccgaggccgaacggctggccgaagaaggagtccag
gagctgaacctcatttcccaggacacgatcaactatggggtggatctgggcctgcggcag
ggcctcacgttgctgctgcgcgagctcgtcaaggtgaaagacatgcgctggattcggcct
ttttacctctacccgcagcaggtcaccgacgagctattggatttatatgccggcgaagag
aagatcaccaaatacatcgacatgccgctccagcacatcaacgacgccatgttgatccgc
atgcgccggctcggcgacaaggccttcctgaccaagctggtcgagcggattcgctcccgc
attcctggggtgacgttccgcacggccttcatcgtcggcttcccgggcgagaccgaggcc
atgtttgatgaactggcgcagttcatggaagaggcggccttcgaccgggtggccgtgttc
ggctattccgacgaggaggagacgcctgcgtgtgatttgcacggcaagatcgaccagtcg
gtcatcgaagagcggcggagcgagttgctgaaccggcaagagacgattgcgctgcgtcag
agcctgggtaaagttggttccaccttgtcggtgctggtcgatggcttgtcagaggacaat
gagtttctgctcgaaggccgtcatgaagggcaggcgccggagatcgatggggtcgtgtac
ttgagcgagagcgatgtcgagcccggcgagttcgtgcaggtgaaaatcaccgaggccacc
gcttacgatctggtcggccaagccattgagccggtccggacaagatcgaaagcgggtctg
cagaccaggcccggaccgtccgccccgcaggcgcgacgggcgccctccgctccacagatg
cgacgagagtcctccgtcgtgcccctcatcatgcccacgaaggtccgggcacagtag
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