Nitrospira tepida: DNFV4_00507
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Entry
DNFV4_00507 CDS
T09383
Name
(GenBank) G:T/U mismatch-specific uracil/thymine DNA-glycosylase
KO
K03649
double-stranded uracil-DNA glycosylase [EC:
3.2.2.28
]
Organism
nti
Nitrospira tepida
Pathway
nti03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
nti00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
DNFV4_00507
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nti03400
]
DNFV4_00507
Enzymes [BR:
nti01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.28 double-stranded uracil-DNA glycosylase
DNFV4_00507
DNA repair and recombination proteins [BR:
nti03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
DNFV4_00507
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
CAI4030083
UniProt:
A0AA86T933
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All DBs
Position
NsDNF:complement(481597..482178)
Genome browser
AA seq
193 aa
AA seq
DB search
MRAKRATSRTSLPDYVGPGLEILFVGINPGLRSMAVGHHFAGYSNRFWKLLYGARLVPEP
LGPEDDRRLPQWGIGITNLIRRPTAGVGSLKAEEYMAGRKRLHSLVLRHRPRIIALLGMT
LLPAIFPPRPGPSTAASIPPRPSPGWQPKRFANTRVFLLPNPSGRNAHYSYEAMLALFAV
LRGATAGERASRN
NT seq
582 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgccaagcgggcgacctctcgtacctccctccctgactatgtcgggccaggcctc
gagattctgttcgtgggcatcaatcccggcctccgttccatggcggtcgggcatcacttc
gccggctattcgaatcgcttttggaaactgctctatggagcccgcctcgtccctgagccc
ctcggcccggaggacgataggcggttgcctcaatgggggatcggcatcacgaatctcatt
cgtcgcccgaccgccggcgtcggcagcctcaaggccgaggaatatatggcaggccggaaa
cggctgcattctctcgtcctccggcatcgcccccgaatcatcgccctgctcggcatgacg
ctgttgcctgcaatctttccacctcgtccgggaccatccaccgccgcttcgattccgccg
cggccctcgccgggctggcagcccaagcgcttcgccaacacgcgcgtattcttgttaccg
aacccaagcgggcggaatgcccattactcgtatgaggccatgttggctctcttcgcggtc
ttgcgaggagccactgctggcgaacgcgccagccggaactga
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