Nitrospira tepida: DNFV4_00765
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Entry
DNFV4_00765 CDS
T09383
Name
(GenBank) Type-5 uracil-DNA glycosylase
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
nti
Nitrospira tepida
Pathway
nti03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
nti00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
DNFV4_00765
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nti03400
]
DNFV4_00765
Enzymes [BR:
nti01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
DNFV4_00765
DNA repair and recombination proteins [BR:
nti03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
DNFV4_00765
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
CAI4030337
UniProt:
A0AA86T4R5
LinkDB
All DBs
Position
NsDNF:766558..767238
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AA seq
226 aa
AA seq
DB search
MRALAILNREIVACTSCPRLVDYRTRVAADKRRQYREWTYWGKPVPGFGDPAARLYVLGL
APAAHGGNRTGRVFTGDRSGDWLYEALHRFGFANQAASLHRDDGLKLSDCYIGATVRCAP
PGNKPKPNEFLACRRFLLQEIQSLRRVCVVVTLGKIAFDHYLKARTELGWEVPKPVPRFA
HKTVCRLPAGVTLIGSYHPSQQNTFTGKLTRPMFHSVFEEARRILS
NT seq
681 nt
NT seq
+upstream
nt +downstream
nt
atgcgggccttggccattctgaaccgggaaatcgtggcctgcacgagctgcccccggctt
gtggactatcggacccgcgtggcggcggacaagcgccgacagtaccgcgaatggacttat
tgggggaaaccggtgcccggttttggagatcccgcggcccgcctgtacgtgctgggcctc
gcgccggctgcccacggagggaaccggaccggacgggtgttcaccggagatcggagcggc
gactggctgtacgaagccctgcatcgattcgggtttgccaaccaggccgcgtccctgcat
cgggacgatgggctcaagctctcggactgctatatcggggcgactgtccgctgcgcgccg
cccggcaacaagccgaagccgaacgagttcttagcctgccggcggtttctgctccaggag
attcaatcgctcaggagggtctgcgtggtggtgacgttgggcaaaattgcgttcgaccac
tacctgaaagcgaggacggaactcggatgggaggttccgaaaccggttcctcgctttgcg
cataagacggtctgccggctaccggccggcgtaacgctcatcggctcctatcaccccagc
cagcagaacaccttcaccggcaagctcacgagaccgatgttccactcggtgtttgaagag
gcgcggcggattctctcttaa
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